Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G021500 Phaseolus vulgaris HOM05D002799 ORTHO05D007076 6.0e-216 753.8 360 100.0
VMungo1127G2112 Vigna mungo HOM05D002799 ORTHO05D007076 3.3e-198 694.9 363 91.2
Glyma.12G019100 Glycine max HOM05D002799 ORTHO05D007076 2.0e-171 605.9 363 81.8
Ca_29855_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 1.4e-151 540.0 364 73.6
Ca_04931_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 4.1e-148 528.5 354 74.0
Medtr4g077510 Medicago truncatula HOM05D002799 ORTHO05D007076 4.2e-145 518.5 314 79.9
Lj3g0008833 Lotus japonicus HOM05D002799 ORTHO05D007076 2.7e-144 515.8 357 73.4
arahy.Tifrunner.gnm1.ann1.IZ2599 Arachis hypogaea HOM05D002799 ORTHO05D007076 1.4e-143 513.5 367 70.8
arahy.Tifrunner.gnm1.ann1.ZMX436 Arachis hypogaea HOM05D002799 ORTHO05D007076 3.3e-142 508.8 366 70.8
GSVIVG01024449001 Vitis vinifera HOM05D002799 ORTHO05D007076 1.1e-137 493.8 349 68.2
CiPaw.05G237100 Carya illinoinensis HOM05D002799 ORTHO05D007076 6.1e-136 488.0 339 69.9
Manes.08G164400 Manihot esculenta HOM05D002799 ORTHO05D007076 8.8e-135 484.2 326 74.2
Ciclev10001355m.g Citrus clementina HOM05D002799 ORTHO05D007076 5.7e-134 481.5 333 71.5
Atru.chr12.2008 Acer truncatum HOM05D002799 ORTHO05D007076 9.7e-134 480.7 342 70.8
QL09p025824 Quercus lobata HOM05D002799 ORTHO05D007076 9.7e-134 480.7 361 66.5
Lalb_Chr03g0024441 Lupinus albus HOM05D002799 ORTHO05D007076 3.7e-133 478.8 303 76.9
Prupe.2G323900 Prunus persica HOM05D002799 ORTHO05D007076 1.1e-132 477.2 344 68.9
Potri.015G079500 Populus trichocarpa HOM05D002799 ORTHO05D007076 3.1e-132 475.7 320 74.1
Eucgr.K00095 Eucalyptus grandis HOM05D002799 ORTHO05D007076 2.0e-131 473.0 338 68.9
Actinidia08737 Actinidia chinensis HOM05D002799 ORTHO05D007076 2.6e-131 472.6 352 66.2
Duzib211G0014 Durio zibethinus HOM05D002799 ORTHO05D007076 4.5e-131 471.9 314 72.0
TAR374G0973 Trochodendron aralioides HOM05D002799 ORTHO05D007076 4.5e-131 471.9 343 66.5
COL.COLO4_24619 Corchorus olitorius HOM05D002799 ORTHO05D007076 5.9e-131 471.5 326 69.3
Thecc.08G172500 Theobroma cacao HOM05D002799 ORTHO05D007076 2.9e-130 469.2 322 70.8
Gohir.A09G055000 Gossypium hirsutum HOM05D002799 ORTHO05D007076 3.8e-130 468.8 316 71.5
Gorai.006G053300 Gossypium raimondii HOM05D002799 ORTHO05D007076 2.5e-129 466.1 318 70.8
Dinv17267 Davidia involucrata HOM05D002799 ORTHO05D007076 5.5e-129 464.9 333 69.1
Thhalv10002559m.g Eutrema salsugineum HOM05D002799 ORTHO05D007076 7.2e-129 464.5 321 69.2
Gohir.D09G053900 Gossypium hirsutum HOM05D002799 ORTHO05D007076 1.6e-128 463.4 317 69.7
BcaC01g03181 Brassica carinata HOM05D002799 ORTHO05D007076 4.7e-128 461.8 327 68.8
BolC3t17806H Brassica oleracea HOM05D002799 ORTHO05D007076 4.7e-128 461.8 327 68.8
CSS0010295 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D007076 6.1e-128 461.5 343 65.3
Sp3g23560 Schrenkiella parvula HOM05D002799 ORTHO05D007076 6.1e-128 461.5 368 63.3
A03p44540 Brassica napus HOM05D002799 ORTHO05D007076 1.0e-127 460.7 327 68.2
BraA03t13587Z Brassica rapa HOM05D002799 ORTHO05D007076 1.0e-127 460.7 327 68.2
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.3e-127 459.5 295 71.2
C03p55340 Brassica napus HOM05D002799 ORTHO05D007076 3.0e-127 459.1 327 68.5
MSTRG.11401 Avicennia marina HOM05D002799 ORTHO05D007076 1.2e-126 457.2 319 69.6
CsaV3_4G004510 Cucumis sativus L. HOM05D002799 ORTHO05D007076 1.2e-126 457.2 335 68.1
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.5e-126 456.8 295 71.2
Carub.0003s2662 Capsella rubella HOM05D002799 ORTHO05D007076 3.4e-126 455.7 312 69.2
BcaB08g34494 Brassica carinata HOM05D002799 ORTHO05D007076 4.4e-126 455.3 331 67.7
FAN10G3482 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.4e-126 455.3 295 70.8
Sed0006194 Sechium edule HOM05D002799 ORTHO05D007076 5.7e-126 454.9 322 67.7
TWI34G0554 Tripterygium wilfordii HOM05D002799 ORTHO05D007076 5.7e-126 454.9 336 66.1
AT2G04940 Arabidopsis thaliana HOM05D002799 ORTHO05D007076 7.5e-126 454.5 310 68.1
CANSAT21G1863 Cannabis sativa HOM05D002799 ORTHO05D007076 7.5e-126 454.5 331 68.9
FvH4_7g33590 Fragaria vesca HOM05D002799 ORTHO05D007076 7.5e-126 454.5 304 68.8
MD01G1233700 Malus domestica HOM05D002799 ORTHO05D007076 3.7e-125 452.2 336 66.4
SalBow5G5430 Salvia bowleyana HOM05D002799 ORTHO05D007076 1.1e-124 450.7 319 68.3
RcHm_v2.0_Chr1g0383851 Rosa chinensis HOM05D002799 ORTHO05D007076 2.4e-124 449.5 262 78.6
AL3G42700 Arabidopsis lyrata HOM05D002799 ORTHO05D007076 4.1e-124 448.7 310 68.7
CARHR102970 Cardamine hirsuta HOM05D002799 ORTHO05D007076 5.4e-124 448.4 310 68.7
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 9.1e-124 447.6 291 71.5
THA.LOC104815357 Tarenaya hassleriana HOM05D002799 ORTHO05D007076 1.2e-123 447.2 323 67.5
CAN.G289.47 Capsicum annuum HOM05D002799 ORTHO05D007076 1.6e-123 446.8 359 64.1
EL10Ac3g05098 Beta vulgaris HOM05D002799 ORTHO05D007076 1.9e-121 439.9 307 69.1
ATR0829G228 Amborella trichopoda HOM05D002799 ORTHO05D007076 2.5e-121 439.5 323 63.2
Aqoxy3G02040 Aquilegia oxysepala HOM05D002799 ORTHO05D007076 3.2e-121 439.1 307 67.4
Solyc03g006460.4 Solanum lycopersicum HOM05D002799 ORTHO05D007076 3.2e-121 439.1 297 72.4
Psat7g171360 Pisum sativum HOM05D002799 ORTHO05D007076 7.2e-121 438.0 366 63.1
MBI04_g21139_MAGBIO Magnolia biondii HOM05D002799 ORTHO05D007076 2.1e-120 436.4 312 65.1
Aa31LG3G2760 Aethionema arabicum HOM05D002799 ORTHO05D007076 2.7e-120 436.0 309 69.3
Sopen03g002460 Solanum pennellii HOM05D002799 ORTHO05D007076 2.7e-120 436.0 257 79.8
Nn1g02009 Nelumbo nucifera HOM05D002799 ORTHO05D007076 3.6e-120 435.6 345 61.2
vmacro06500 Vaccinium macrocarpon HOM05D002799 ORTHO05D007076 4.0e-119 432.2 323 66.6
Migut.I00118 Erythranthe guttata HOM05D002799 ORTHO05D007076 8.8e-119 431.0 321 67.0
Hma1.2p1_0758F.1_g213600 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 2.0e-118 429.9 246 80.5
PGSC0003DMG400012810 Solanum tuberosum HOM05D002799 ORTHO05D007076 2.6e-118 429.5 345 63.5
Ah.13g072670 Amaranthus hybridus HOM05D002799 ORTHO05D007076 4.4e-118 428.7 303 67.3
AUR62028151 Chenopodium quinoa HOM05D002799 ORTHO05D007076 4.4e-118 428.7 294 69.0
Cc03_g15080 Coffea canephora HOM05D002799 ORTHO05D007076 5.7e-118 428.3 320 66.6
PGR004G1694 Punica granatum HOM05D002799 ORTHO05D007076 6.3e-117 424.9 329 65.3
Lj1C1032G6 Lonicera japonica HOM05D002799 ORTHO05D007076 1.8e-116 423.3 314 67.5
PSO782G0547 Papaver somniferum HOM05D002799 ORTHO05D007076 1.2e-115 420.6 340 60.3
MD07G1305800 Malus domestica HOM05D002799 ORTHO05D007076 3.5e-115 419.1 351 60.7
PSO063G7569 Papaver somniferum HOM05D002799 ORTHO05D007076 1.1e-113 414.1 336 60.7
HPP92_015127 Vanilla planifolia HOM05D002799 ORTHO05D007076 1.5e-113 413.7 271 72.7
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 7.2e-113 411.4 303 65.0
ClCG07G017310 Citrullus lanatus HOM05D002799 ORTHO05D007076 2.1e-112 409.8 336 62.2
Oeu014983.2 Olea europaea HOM05D002799 ORTHO05D007076 2.1e-112 409.8 367 58.6
DCAR_009002 Daucus carota HOM05D002799 ORTHO05D007076 4.7e-112 408.7 328 63.4
MELO3C017614.2 Cucumis melo HOM05D002799 ORTHO05D007076 1.0e-111 407.5 363 59.0
ECA233G3743 Erigeron canadensis HOM05D002799 ORTHO05D007076 8.9e-111 404.4 301 66.4
Lsat_1_v5_gn_8_3761 Lactuca sativa HOM05D002799 ORTHO05D007076 3.4e-110 402.5 321 62.9
HanXRQChr04g0105251 Helianthus annuus HOM05D002799 ORTHO05D007076 9.8e-110 401.0 335 62.1
Zm00001eb430250 Zea mays HOM05D002799 ORTHO05D007076 1.1e-105 387.5 349 56.2
Hund09770 Selenicereus undatus HOM05D002799 ORTHO05D007076 4.3e-105 385.6 330 60.3
AUR62005914 Chenopodium quinoa HOM05D002799 ORTHO05D007076 5.2e-103 378.6 290 63.4
Os04g0599400 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 1.2e-102 377.5 335 58.8
unitig_62.g23564 Utricularia gibba HOM05D002799 ORTHO05D007076 1.2e-99 367.5 321 58.6
Solyc03g006452.1 Solanum lycopersicum HOM05D002799 ORTHO05D007076 6.2e-96 355.1 303 61.4
Os02g0238500 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 2.6e-94 349.7 222 72.5
Sc13g0010800 Simmondsia chinensis HOM05D002799 ORTHO05D007076 4.4e-94 349.0 300 58.7
Cpa.g.sc67.53 Carica papaya HOM05D002799 ORTHO05D007076 6.4e-93 345.1 192 81.2
Lj2A621G40 Lonicera japonica HOM05D002799 ORTHO05D007076 7.1e-92 341.7 272 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1885 Anthoceros agrestis HOM05D002799 ORTHO05D007076 1.5e-89 334.0 344 50.6
Actinidia34299 Actinidia chinensis HOM05D002799 ORTHO05D007076 1.6e-83 313.9 193 75.1
Pp3c5_23880 Physcomitrium patens HOM05D002799 ORTHO05D007076 6.0e-83 312.0 280 54.6
Pp3c3_18900 Physcomitrium patens HOM05D002799 ORTHO05D007076 2.1e-80 303.5 281 53.0
Cfa015896 Carpinus fangiana HOM05D002799 ORTHO05D007076 7.1e-76 288.5 342 51.5
Mapoly0041s0072 Marchantia polymorpha HOM05D002799 ORTHO05D007076 1.2e-75 287.7 274 52.9
CBR_g26239 Chara braunii HOM05D002799 ORTHO05D007076 3.3e-73 279.6 306 45.8
SMO196G0267 Selaginella moellendorffii HOM05D002799 ORTHO05D007076 3.8e-69 266.2 196 61.2
Lj3A801T16 Lonicera japonica HOM05D002799 ORTHO05D007076 3.0e-66 256.5 230 53.0
Sabra15G0103700 Salix brachista HOM05D002799 ORTHO05D007076 1.9e-60 237.3 290 47.2
FvH4_7g33592 Fragaria vesca HOM05D002799 ORTHO05D007076 3.0e-58 229.9 123 83.7
Zm00001eb071960 Zea mays HOM05D002799 ORTHO05D007076 4.0e-55 219.5 125 75.2
Hma1.2p1_0758F.1_g213590 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 5.5e-52 209.1 181 57.5
FvH4_7g33593 Fragaria vesca HOM05D002799 ORTHO05D007076 2.1e-51 207.2 161 60.2
Sabra15G0103800 Salix brachista HOM05D002799 ORTHO05D007076 8.7e-50 201.8 114 85.1
Haze_00592 Corylus avellana HOM05D002799 ORTHO05D007076 9.6e-49 198.4 212 53.3
Peaxi162Scf00195g01110 Petunia axillaris HOM05D002799 ORTHO05D007076 4.2e-44 183.0 112 75.9
Nitab4.5_0000701g0060 Nicotiana tabacum HOM05D002799 ORTHO05D007076 1.4e-36 157.9 172 51.7
SEGI_10035 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 3.2e-36 156.8 99 72.7
PRCOL_00006278 Prasinoderma coloniale HOM05D002799 ORTHO05D007076 7.2e-36 155.6 270 38.5
VMungo1127G1706 Vigna mungo HOM05D002799 ORTHO05D007076 2.1e-35 154.1 212 44.8
Nitab4.5_0000793g0030 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.8e-32 143.7 173 49.1
Cre06.g267850 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D007076 1.2e-30 138.3 181 39.8
TPR.G21490 Trifolium pratense HOM05D002799 ORTHO05D007076 2.5e-28 130.6 73 89.0
TPR.G19958 Trifolium pratense HOM05D002799 ORTHO05D007076 3.2e-28 130.2 62 90.3
Cfa023729 Carpinus fangiana HOM05D002799 ORTHO05D007076 1.8e-26 124.4 300 29.0
HanXRQChr15g0477781 Helianthus annuus HOM05D002799 ORTHO05D007076 9.1e-23 112.1 98 59.2
Actinidia04566 Actinidia chinensis HOM05D002799 ORTHO05D007076 4.5e-22 109.8 197 38.6
Nitab4.5_0000793g0020 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.5e-20 104.0 151 43.0
QL03p008982 Quercus lobata HOM05D000009 ORTHO05D000008 4.2e-20 103.2 143 45.5
Haze_00593 Corylus avellana HOM05D002799 ORTHO05D007076 5.5e-20 102.8 61 83.6
Zm00001eb315690 Zea mays HOM05D002799 ORTHO05D007076 7.2e-20 102.4 56 75.0
Nitab4.5_0000701g0050 Nicotiana tabacum HOM05D002799 ORTHO05D007076 9.4e-20 102.1 199 39.2
Lj2C621T3 Lonicera japonica HOM05D002799 ORTHO05D007076 1.8e-18 97.8 63 76.2
SEGI_38885 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 5.7e-17 92.8 78 57.7
FAN10G3554 Fragaria x ananassa HOM05D012649 ORTHO05D007076 1.1e-15 88.6 98 43.9
QL03p009165 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-14 83.6 55 72.7
SHI36546 Sapria himalayana HOM05D000107 ORTHO05D000233 1.2e-11 75.1 107 44.9
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 3.7e-08 63.5 45 66.7


User provided reference genes

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