Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 7.1e-120 434.1 246 100.0
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 5.9e-82 308.1 211 86.3
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 9.1e-75 284.3 208 80.8
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 4.5e-74 282.0 208 72.6
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.5e-72 276.2 207 77.8
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 3.8e-65 252.3 242 66.1
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.0e-62 244.2 172 85.5
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.0e-57 227.6 198 63.1
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 3.4e-53 212.6 188 71.3
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 3.4e-53 212.6 208 57.2
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 3.7e-52 209.1 208 59.6
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.6e-50 203.8 208 55.3
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 4.6e-50 202.2 208 53.4
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 7.8e-50 201.4 207 58.9
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.0e-49 201.1 222 51.8
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 5.0e-49 198.7 203 55.7
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.5e-48 196.4 207 51.7
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.3e-48 196.1 207 59.9
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.3e-48 196.1 207 52.7
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 5.6e-48 195.3 201 55.2
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.1e-47 193.4 203 61.6
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 4.7e-47 192.2 208 51.4
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 4.7e-47 192.2 206 58.3
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 2.3e-46 189.9 197 61.4
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.1e-46 189.5 208 51.4
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 6.8e-46 188.3 200 52.5
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 2.6e-45 186.4 211 52.6
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 9.8e-45 184.5 203 51.2
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 2.2e-44 183.3 139 68.3
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 2.2e-44 183.3 203 54.2
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.9e-43 180.3 226 47.3
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 5.4e-43 178.7 208 47.6
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 2.7e-42 176.4 208 47.6
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 2.3e-41 173.3 206 46.6
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.1e-41 172.2 234 50.9
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 1.1e-40 171.0 203 46.3
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.9e-40 170.2 208 47.1
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 6.2e-39 165.2 208 54.8
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 8.1e-39 164.9 172 54.7
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 3.1e-38 162.9 172 53.5
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 3.1e-38 162.9 172 53.5
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 6.8e-38 161.8 172 50.6
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 8.9e-38 161.4 172 51.7
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 5.8e-37 158.7 172 52.9
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 8.4e-36 154.8 203 41.4
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.9e-35 153.7 208 41.3
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.4e-35 153.3 172 48.3
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 4.1e-35 152.5 201 50.7
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 2.7e-34 149.8 172 48.8
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.7e-33 147.1 209 40.7
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 3.3e-32 142.9 172 48.8
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 5.2e-30 135.6 178 44.9
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 9.9e-29 131.3 172 51.7
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 6.4e-28 128.6 208 41.8
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 6.4e-28 128.6 169 42.0
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 3.2e-27 126.3 169 40.2
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 9.3e-27 124.8 169 41.4
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.2e-26 124.4 221 36.7
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.2e-26 124.4 208 39.9
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 3.5e-26 122.9 178 41.0
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.3e-25 120.2 169 42.6
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.9e-25 119.4 169 48.5
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.9e-25 119.4 169 48.5
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 5.1e-25 119.0 169 49.1
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.5e-24 117.5 266 38.3
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 4.3e-24 115.9 169 44.4
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 5.6e-24 115.5 169 39.1
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.3e-23 114.4 169 45.6
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.6e-23 114.0 95 63.2
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.6e-23 114.0 95 63.2
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 6.2e-23 112.1 169 45.6
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 6.2e-23 112.1 169 45.6
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 6.2e-23 112.1 169 45.6
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.3e-20 104.4 169 46.7
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 1.2e-18 97.8 201 33.3
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.1e-16 91.3 204 36.8
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 2.5e-16 90.1 106 46.2
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 2.8e-15 86.7 110 46.4
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 4.8e-15 85.9 100 50.0
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 1.5e-13 80.9 76 61.8
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 2.2e-12 77.0 106 42.5
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.7e-10 70.1 107 48.6
Glyma.12G008800 Glycine max HOM05D007696 ORTHO05D009719 2.3e-09 67.0 44 72.7
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 1.1e-08 64.7 135 34.8
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 5.6e-08 62.4 73 56.2
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 6.2e-07 58.9 73 43.8
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 6.2e-07 58.9 73 43.8
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 8.1e-07 58.5 113 34.5
CSS0046903 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 9.0e-06 55.1 57 56.1


User provided reference genes

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