Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 8.5e-86 320.5 181 100.0
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 2.2e-70 269.2 179 82.7
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 7.0e-48 194.5 182 63.2
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 4.4e-42 175.3 108 78.7
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.4e-40 169.5 167 57.5
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 6.6e-38 161.4 131 64.1
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.5e-37 160.2 163 53.4
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.3e-37 159.1 134 60.4
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.3e-37 158.7 182 53.8
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 7.3e-37 157.9 156 56.4
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 9.5e-37 157.5 192 50.5
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.6e-36 156.8 107 73.8
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.8e-36 156.0 183 49.7
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.6e-36 155.6 185 51.4
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.6e-36 155.6 106 70.8
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 4.7e-36 155.2 108 71.3
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 4.7e-36 155.2 186 50.0
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 4.7e-36 155.2 106 71.7
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 6.1e-36 154.8 106 70.8
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 6.1e-36 154.8 106 70.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.8e-35 153.3 139 59.0
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.1e-35 152.5 106 70.8
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 4.0e-35 152.1 108 69.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 4.0e-35 152.1 108 69.4
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 5.2e-35 151.8 106 70.8
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 8.9e-35 151.0 201 48.8
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 8.9e-35 151.0 107 71.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 4.4e-34 148.7 154 50.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.4e-34 148.7 156 51.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.4e-34 148.7 156 51.9
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 4.4e-34 148.7 181 53.0
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 5.8e-34 148.3 107 69.2
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 5.8e-34 148.3 193 46.1
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.8e-34 148.3 154 50.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 5.8e-34 148.3 173 52.0
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 7.5e-34 147.9 184 53.3
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 9.8e-34 147.5 157 52.9
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.3e-33 147.1 157 51.6
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.3e-33 147.1 109 69.7
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.3e-33 147.1 163 51.5
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-33 146.4 131 61.1
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.7e-33 145.6 101 70.3
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 4.9e-33 145.2 179 49.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 4.9e-33 145.2 122 66.4
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 6.4e-33 144.8 191 51.8
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 6.4e-33 144.8 199 47.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 8.3e-33 144.4 106 68.9
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 8.3e-33 144.4 199 47.7
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 1.1e-32 144.1 108 68.5
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-32 144.1 156 52.6
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-32 144.1 156 51.9
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.1e-32 144.1 135 57.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 2.4e-32 142.9 107 67.3
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 2.4e-32 142.9 163 50.3
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.2e-32 142.5 135 59.3
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 4.1e-32 142.1 197 47.2
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 4.1e-32 142.1 131 58.8
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 4.1e-32 142.1 133 54.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 7.0e-32 141.4 101 67.3
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 9.2e-32 141.0 100 67.0
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.2e-31 140.6 160 50.0
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-31 140.2 156 50.6
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 2.0e-31 139.8 107 67.3
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 4.6e-31 138.7 125 56.8
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 4.6e-31 138.7 161 49.1
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 4.6e-31 138.7 108 65.7
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 2.3e-30 136.3 110 65.5
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 3.0e-30 136.0 110 62.7
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 3.0e-30 136.0 136 58.8
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 5.0e-30 135.2 176 46.6
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 5.0e-30 135.2 161 49.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 5.0e-30 135.2 161 49.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 5.0e-30 135.2 161 49.1
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 5.0e-30 135.2 150 52.7
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 6.6e-30 134.8 104 65.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 6.6e-30 134.8 104 66.3
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.1e-29 134.0 138 52.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.5e-29 132.9 104 65.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 2.5e-29 132.9 161 48.4
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 3.3e-29 132.5 84 75.0
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 3.3e-29 132.5 145 51.7
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 3.3e-29 132.5 104 64.4
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.4e-27 127.1 103 65.0
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 3.4e-26 122.5 103 58.3
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 9.8e-26 120.9 103 57.3
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 4.1e-24 115.5 101 53.5
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 7.0e-24 114.8 124 52.4
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.0e-22 110.9 165 43.6
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 2.1e-20 103.2 115 52.2
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 4.0e-19 99.0 100 57.0
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 9.9e-18 94.4 196 37.2
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.4e-16 90.5 106 48.1
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 7.8e-15 84.7 54 72.2
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 2.3e-14 83.2 121 42.1
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.5e-13 79.7 134 44.8
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 4.3e-13 79.0 125 36.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.3e-13 78.2 42 83.3
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 2.1e-12 76.6 47 72.3
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.6e-12 75.9 115 43.5
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.6e-12 75.9 115 43.5
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 8.1e-12 74.7 70 48.6
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 3.1e-11 72.8 91 47.3
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 5.2e-11 72.0 104 41.3
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.7e-09 67.0 60 60.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.1e-08 64.3 62 56.5
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.2e-07 60.8 162 34.6
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.3e-06 57.4 85 44.7


User provided reference genes

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