Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 3.0e-134 481.9 246 100.0
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 2.8e-116 422.2 249 85.9
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 2.3e-102 375.9 244 79.9
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 3.3e-101 372.1 249 77.1
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 2.5e-88 329.3 249 68.3
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 6.3e-84 314.7 233 68.7
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 1.1e-83 313.9 241 68.0
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 1.8e-83 313.2 241 65.1
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 1.6e-82 310.1 252 61.1
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 4.5e-82 308.5 245 65.3
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 7.7e-82 307.8 207 72.9
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 7.7e-82 307.8 241 63.1
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 1.0e-81 307.4 207 71.0
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 1.0e-81 307.4 238 65.1
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.3e-81 307.0 228 66.7
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 1.7e-81 306.6 209 70.8
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 1.7e-81 306.6 255 61.6
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 2.2e-81 306.2 204 69.6
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 2.2e-81 306.2 225 67.1
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 2.9e-81 305.8 238 62.6
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 8.5e-81 304.3 246 60.6
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 1.1e-80 303.9 228 65.8
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 2.5e-80 302.8 202 72.3
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 4.2e-80 302.0 250 64.0
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 5.5e-80 301.6 250 64.0
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 5.5e-80 301.6 228 65.4
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 7.2e-80 301.2 226 65.0
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 9.4e-80 300.8 227 64.3
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 1.2e-79 300.4 252 58.7
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 1.6e-79 300.1 202 71.8
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 2.1e-79 299.7 202 71.3
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 2.7e-79 299.3 240 62.9
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 2.7e-79 299.3 207 71.5
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 1.0e-78 297.4 223 66.8
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 1.4e-78 297.0 243 62.1
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 3.0e-78 295.8 226 62.8
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 4.0e-78 295.4 234 63.7
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 5.2e-78 295.0 216 66.7
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 1.5e-77 293.5 223 65.5
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.5e-77 293.5 210 67.1
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 3.4e-77 292.4 257 56.4
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 4.4e-77 292.0 223 63.2
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 5.7e-77 291.6 241 60.2
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 9.8e-77 290.8 211 65.9
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 2.2e-76 289.7 241 62.7
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.8e-76 289.3 227 63.0
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 2.8e-76 289.3 225 63.6
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 2.8e-76 289.3 204 68.1
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 2.8e-76 289.3 211 65.4
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 6.3e-76 288.1 202 67.3
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 6.3e-76 288.1 212 65.6
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 1.1e-75 287.3 226 65.0
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 1.4e-75 287.0 227 67.0
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 1.8e-75 286.6 239 60.3
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 2.4e-75 286.2 202 67.3
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 2.4e-75 286.2 228 68.9
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 2.4e-75 286.2 217 65.0
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 4.1e-75 285.4 212 65.1
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 5.4e-75 285.0 228 68.4
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 7.0e-75 284.6 212 64.6
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 7.0e-75 284.6 212 64.6
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 7.0e-75 284.6 212 64.6
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.6e-74 283.5 228 62.7
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 2.0e-74 283.1 212 64.6
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 2.7e-74 282.7 202 65.3
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 4.5e-74 282.0 234 58.5
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 4.5e-74 282.0 221 63.3
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 5.9e-74 281.6 228 61.0
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 7.7e-74 281.2 202 66.3
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 1.7e-73 280.0 228 61.4
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 2.2e-73 279.6 220 64.1
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 3.8e-73 278.9 236 60.2
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 5.0e-73 278.5 231 60.2
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.1e-72 277.3 226 61.5
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.5e-72 276.9 234 59.4
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 1.5e-72 276.9 202 66.3
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 1.9e-72 276.6 224 66.5
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 4.2e-72 275.4 248 57.7
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 5.5e-72 275.0 231 58.4
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 9.4e-72 274.2 204 67.2
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 1.6e-71 273.5 230 62.2
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 1.6e-71 273.5 230 62.2
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 1.6e-71 273.5 230 62.2
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 4.7e-71 271.9 206 62.6
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 4.7e-71 271.9 230 61.7
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 8.0e-71 271.2 230 64.8
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 3.0e-70 269.2 230 64.3
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 4.0e-70 268.9 222 61.7
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 6.8e-70 268.1 270 51.9
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 8.8e-70 267.7 316 47.2
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 1.3e-68 263.8 249 57.0
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 1.7e-68 263.5 243 55.1
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 3.7e-68 262.3 161 73.3
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 4.1e-67 258.8 210 62.4
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 5.4e-67 258.5 324 45.7
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 9.2e-67 257.7 213 58.7
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 6.6e-65 251.5 244 52.5
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 8.6e-65 251.1 209 59.3
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 9.5e-64 247.7 240 52.5
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 6.1e-63 245.0 238 52.5
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.8e-62 243.4 230 50.9
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 2.0e-61 240.0 281 45.9
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 3.4e-61 239.2 238 51.7
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 4.4e-61 238.8 243 51.4
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 8.3e-60 234.6 221 51.6
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 4.1e-59 232.3 246 54.1
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 4.3e-56 222.2 198 54.0
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 3.4e-53 212.6 227 51.1
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 7.5e-53 211.5 227 50.7
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.1e-48 197.6 237 43.0
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 8.9e-46 188.0 246 45.5
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 2.0e-37 160.2 195 41.0
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 6.4e-36 155.2 195 38.5
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 2.1e-31 140.2 120 56.7
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 6.9e-30 135.2 168 37.5
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 3.1e-22 109.8 183 33.9
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 2.1e-15 87.0 96 50.0
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 3.6e-15 86.3 75 58.7


User provided reference genes

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