Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G166000 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 6.2e-85 317.4 157 100.0
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 3.0e-63 245.4 167 77.2
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 2.4e-52 209.1 132 81.8
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 9.1e-44 180.6 166 60.8
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 1.3e-42 176.8 163 60.7
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-13 79.0 94 41.5
ECA240G1454 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-13 79.0 94 41.5
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 1.3e-10 70.5 44 72.7
Psat5g135120 Pisum sativum HOM05D000004 ORTHO05D011729 1.7e-10 70.1 106 38.7
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 1.7e-10 70.1 104 32.7
ECA246G3913 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-10 69.7 102 36.3
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 3.8e-10 68.9 44 70.5
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 5.0e-10 68.6 44 70.5
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 8.6e-10 67.8 40 77.5
Ca_11979_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-09 67.0 86 38.4
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 1.9e-09 66.6 44 68.2
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 2.5e-09 66.2 104 35.6
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 2.5e-09 66.2 44 65.9
Psat6g240160 Pisum sativum HOM05D003122 ORTHO05D000002 9.5e-09 64.3 66 42.4
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 1.6e-08 63.5 72 40.3
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.8e-08 62.8 115 31.3
ECA246G3513 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-08 62.8 102 34.3
Psat1g189200 Pisum sativum HOM05D003122 ORTHO05D000002 2.8e-08 62.8 108 35.2
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 3.6e-08 62.4 75 42.7
Psat1g080840 Pisum sativum HOM05D003122 ORTHO05D000002 3.6e-08 62.4 63 41.3
Psat2g123280 Pisum sativum HOM05D014306 ORTHO05D011729 3.6e-08 62.4 99 33.3
Psat2g183440 Pisum sativum HOM05D003122 ORTHO05D012218 3.6e-08 62.4 75 38.7
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 3.6e-08 62.4 38 68.4
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 4.7e-08 62.0 44 63.6
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 4.7e-08 62.0 44 63.6
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 4.7e-08 62.0 44 63.6
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 4.7e-08 62.0 44 63.6
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 4.7e-08 62.0 38 68.4
Psat2g101960 Pisum sativum HOM05D003122 ORTHO05D012218 1.0e-07 60.8 112 33.0
Ca_25300_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-07 60.5 71 38.0
Psat6g091760 Pisum sativum HOM05D002642 ORTHO05D002834 1.4e-07 60.5 115 27.8
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 1.4e-07 60.5 38 63.2
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 2.3e-07 59.7 38 65.8
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 3.0e-07 59.3 62 45.2
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 3.0e-07 59.3 66 45.5
Psat4g080960 Pisum sativum HOM05D014306 ORTHO05D011729 3.0e-07 59.3 102 32.4
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 4.0e-07 58.9 38 63.2
Psat4g087200 Pisum sativum HOM05D003122 ORTHO05D011729 4.0e-07 58.9 96 34.4
Psat4g099280 Pisum sativum HOM05D003122 ORTHO05D000002 4.0e-07 58.9 63 39.7
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 5.2e-07 58.5 62 45.2
Psat5g009600 Pisum sativum HOM05D000004 ORTHO05D011729 5.2e-07 58.5 73 35.6
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 5.2e-07 58.5 72 36.1
arahy.Tifrunner.gnm1.ann1.9ST4S6 Arachis hypogaea HOM05D007513 ORTHO05D008148 6.8e-07 58.2 41 63.4
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 6.8e-07 58.2 38 63.2
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 6.8e-07 58.2 66 47.0
Psat1g070680 Pisum sativum HOM05D014306 ORTHO05D011729 6.8e-07 58.2 83 37.3
Psat3g051400 Pisum sativum HOM05D003122 ORTHO05D000002 6.8e-07 58.2 71 36.6
Psat5g112280 Pisum sativum HOM05D003122 ORTHO05D000002 6.8e-07 58.2 71 36.6
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 8.9e-07 57.8 38 60.5
Psat4g146680 Pisum sativum HOM05D014306 ORTHO05D011729 8.9e-07 57.8 98 32.7
Psat5g110360 Pisum sativum HOM05D003122 ORTHO05D011729 8.9e-07 57.8 104 33.7
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 8.9e-07 57.8 38 63.2
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 1.2e-06 57.4 38 60.5
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 1.2e-06 57.4 38 60.5
arahy.Tifrunner.gnm1.ann1.0NDU7B Arachis hypogaea HOM05D007513 ORTHO05D008148 1.5e-06 57.0 42 61.9
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.6e-06 56.2 38 57.9
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.6e-06 56.2 38 57.9
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 2.6e-06 56.2 38 57.9
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 2.6e-06 56.2 37 62.2
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 2.6e-06 56.2 37 62.2
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 2.6e-06 56.2 68 39.7
Psat4g090320 Pisum sativum HOM05D000004 ORTHO05D000002 3.4e-06 55.8 84 36.9
Psat4g223680 Pisum sativum HOM05D000004 ORTHO05D011729 3.4e-06 55.8 100 31.0
Sopen10g022440 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 55.8 68 44.1
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 3.4e-06 55.8 38 57.9
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 4.4e-06 55.5 38 60.5
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-06 55.5 80 43.8
PSO063G5209 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-06 55.5 52 50.0
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 4.4e-06 55.5 38 60.5
ECA233G0465 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-06 55.1 119 34.5
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 5.8e-06 55.1 72 38.9
PSO063G4960 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-06 55.1 54 48.1
COL.COLO4_10142 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.5e-06 54.7 69 37.7
PSO170G1392 Papaver somniferum HOM05D000004 ORTHO05D000002 7.5e-06 54.7 54 44.4
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 9.8e-06 54.3 44 50.0
PSO170G6792 Papaver somniferum HOM05D000004 ORTHO05D000002 9.8e-06 54.3 65 46.2
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-06 54.3 77 35.1
Sopen05g011810 Solanum pennellii HOM05D000004 ORTHO05D000002 9.8e-06 54.3 68 44.1
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 9.8e-06 54.3 38 55.3


User provided reference genes

Program Settings