Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 7.6e-272 939.9 466 100.0
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.1e-251 872.8 466 91.4
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 4.2e-238 827.8 468 87.2
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 3.7e-234 814.7 472 86.4
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.2e-216 756.5 469 81.0
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 4.5e-208 728.0 465 76.8
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 5.9e-208 727.6 467 77.1
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 5.0e-207 724.5 456 77.0
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 8.5e-207 723.8 465 76.1
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.4e-204 716.5 420 81.7
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 1.5e-203 713.0 460 76.5
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 3.4e-203 711.8 454 77.3
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 4.8e-202 708.0 451 76.7
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 6.3e-202 707.6 458 76.4
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 7.0e-201 704.1 463 76.2
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 5.9e-200 701.0 457 76.4
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 1.3e-199 699.9 454 75.8
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.7e-199 699.5 458 76.0
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 7.2e-198 694.1 468 75.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 7.2e-198 694.1 451 74.1
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 1.2e-197 693.3 459 73.9
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.2e-197 693.3 445 74.4
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 1.6e-197 693.0 460 73.0
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 4.7e-197 691.4 458 75.5
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 8.0e-197 690.6 418 80.1
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.8e-196 689.5 459 74.5
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.8e-196 689.5 455 73.0
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 3.0e-196 688.7 462 74.7
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 3.0e-196 688.7 460 72.8
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.2e-196 688.0 470 72.6
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.8e-196 687.6 459 74.5
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 6.8e-196 687.6 455 72.5
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 5.7e-195 684.5 459 72.5
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 9.8e-195 683.7 471 73.0
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 9.8e-195 683.7 460 73.9
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 1.7e-194 682.9 448 74.3
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 3.7e-194 681.8 451 72.5
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 6.3e-194 681.0 397 81.4
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.1e-193 680.2 462 73.4
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 2.4e-193 679.1 457 73.1
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 4.1e-193 678.3 463 72.1
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.1e-193 678.3 459 71.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 7.0e-193 677.6 424 77.1
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 7.0e-193 677.6 464 72.8
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 9.2e-193 677.2 459 71.5
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.6e-192 676.4 459 71.2
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.0e-191 673.7 455 73.0
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 1.7e-191 672.9 454 72.7
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 8.6e-191 670.6 455 73.0
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 8.6e-191 670.6 459 70.8
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.1e-190 670.2 454 72.9
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.9e-190 669.5 407 79.1
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.6e-189 665.2 423 75.9
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.4e-188 663.3 431 75.4
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.8e-188 662.9 462 71.4
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 4.0e-188 661.8 411 76.9
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 6.8e-188 661.0 462 70.1
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 9.8e-187 657.1 455 70.3
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 2.9e-186 655.6 454 71.4
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.1e-185 653.7 425 75.5
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 1.4e-185 653.3 444 70.5
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 3.2e-185 652.1 426 76.1
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 4.1e-185 651.7 425 75.3
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 7.0e-185 651.0 444 70.3
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 9.2e-185 650.6 426 76.3
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.2e-184 650.2 478 69.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 2.0e-184 649.4 460 72.0
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 2.0e-184 649.4 460 72.0
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 4.6e-184 648.3 425 75.5
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 6.0e-184 647.9 458 72.1
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 2.3e-183 646.0 458 72.1
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 8.6e-183 644.0 460 71.1
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 1.5e-182 643.3 415 75.9
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 5.6e-182 641.3 452 71.7
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 5.6e-182 641.3 483 67.5
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 7.3e-182 641.0 460 70.9
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 4.7e-181 638.3 454 67.6
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 6.2e-181 637.9 422 74.9
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 6.2e-181 637.9 504 64.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.3e-180 636.0 452 70.8
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 6.8e-180 634.4 455 66.2
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 8.9e-180 634.0 395 78.2
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.2e-176 623.6 458 66.4
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.8e-172 609.8 407 72.7
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.1e-169 600.5 376 76.3
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 4.7e-165 585.1 357 77.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.5e-158 563.5 416 64.9
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 3.3e-158 562.4 380 72.9
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.3e-157 560.5 416 64.2
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.8e-154 548.9 478 62.1
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.4e-153 546.2 416 63.2
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 5.4e-145 518.5 328 78.7
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 7.9e-136 488.0 343 71.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 7.9e-128 461.5 459 56.2
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 9.7e-118 427.9 411 53.3
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 6.9e-116 421.8 400 53.5
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.5e-115 420.6 412 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 7.9e-112 408.3 400 53.2
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 5.5e-105 385.6 396 50.0
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 2.1e-96 357.1 416 44.7
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.2e-72 278.1 192 68.8
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 2.3e-66 257.3 187 70.6
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.3e-65 253.1 195 63.6
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.3e-65 253.1 195 63.6
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.3e-53 214.9 153 64.1
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.6e-24 118.2 88 69.3
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 6.5e-21 106.3 61 82.0


User provided reference genes

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