Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 8.3e-127 457.2 259 100.0
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 4.6e-109 398.3 257 89.5
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.1e-83 313.9 258 76.4
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 9.6e-75 284.3 257 71.2
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 8.4e-63 244.6 256 67.2
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 3.2e-62 242.7 256 65.6
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 7.1e-62 241.5 255 65.1
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 6.0e-61 238.4 258 59.3
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 6.7e-60 235.0 255 65.1
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 3.1e-57 226.1 258 63.6
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.0e-55 221.1 246 63.0
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 6.5e-55 218.4 246 63.0
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 3.3e-43 179.5 277 54.9
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 5.7e-43 178.7 264 48.1
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.0e-39 167.9 243 54.7
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 6.5e-39 165.2 238 51.7
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.2e-37 161.0 247 44.1
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 5.2e-36 155.6 237 49.8
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 5.2e-36 155.6 273 46.2
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 6.7e-36 155.2 182 53.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 7.4e-35 151.8 193 50.3
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 7.4e-35 151.8 187 51.9
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.3e-34 151.0 265 48.7
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.3e-34 151.0 186 55.4
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 3.7e-34 149.4 240 51.2
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 3.7e-34 149.4 254 50.8
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.8e-33 147.1 192 50.0
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 2.4e-33 146.7 267 46.1
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 5.3e-33 145.6 248 46.8
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 4.5e-32 142.5 255 49.8
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.5e-32 142.5 198 50.0
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 5.9e-32 142.1 255 49.4
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.7e-31 140.6 255 49.0
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 5.0e-31 139.0 192 55.7
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 6.5e-31 138.7 265 43.8
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 8.5e-31 138.3 166 58.4
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.5e-30 136.7 249 47.4
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 7.2e-30 135.2 178 54.5
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 7.2e-30 135.2 263 45.2
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 7.2e-30 135.2 100 70.0
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 7.2e-30 135.2 188 54.8
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 2.7e-29 133.3 162 61.7
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 8.0e-29 131.7 151 53.6
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 8.0e-29 131.7 239 47.7
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.8e-28 130.6 113 65.5
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 5.2e-28 129.0 263 43.0
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 6.8e-28 128.6 198 45.5
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.2e-27 127.9 196 44.4
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 2.0e-27 127.1 218 51.8
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 2.6e-27 126.7 237 43.0
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 3.4e-27 126.3 220 44.5
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 5.7e-27 125.6 167 47.9
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 5.7e-27 125.6 229 42.8
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 9.7e-27 124.8 195 44.6
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 1.3e-26 124.4 209 44.5
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 2.2e-26 123.6 173 52.6
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.8e-26 123.2 118 70.3
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 2.8e-26 123.2 124 52.4
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 3.7e-26 122.9 161 52.2
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 6.3e-26 122.1 277 36.1
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 6.3e-26 122.1 181 50.3
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.4e-25 120.9 227 43.6
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 3.1e-25 119.8 214 42.1
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 9.1e-25 118.2 167 45.5
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 9.1e-25 118.2 241 42.3
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 9.1e-25 118.2 269 41.3
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.7e-24 116.7 211 46.0
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 3.5e-24 116.3 98 64.3
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 4.5e-24 115.9 212 47.6
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 1.0e-23 114.8 142 54.2
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 2.2e-23 113.6 256 39.8
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 6.5e-23 112.1 122 64.8
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.5e-22 110.9 211 48.8
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.9e-22 110.5 214 44.9
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.5e-22 110.2 165 46.7
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 7.2e-22 108.6 218 40.8
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 9.4e-22 108.2 230 39.6
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 1.2e-21 107.8 126 63.5
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-21 107.8 138 52.2
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 1.2e-21 107.8 230 40.4
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.2e-21 107.8 213 48.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 4.7e-21 105.9 204 41.7
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 4.7e-21 105.9 259 43.6
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 6.1e-21 105.5 148 50.7
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 8.0e-21 105.1 219 39.3
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 8.0e-21 105.1 64 78.1
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.0e-20 104.8 172 45.3
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.4e-20 104.4 176 42.0
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.8e-20 104.0 188 43.6
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 1.8e-20 104.0 173 44.5
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 4.0e-20 102.8 163 48.5
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 4.0e-20 102.8 219 40.2
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 4.0e-20 102.8 192 41.7
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.8e-20 101.7 204 40.7
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 8.8e-20 101.7 192 42.2
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 1.2e-19 101.3 231 41.1
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.0e-19 100.5 161 48.4
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 4.4e-19 99.4 280 37.1
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 1.7e-18 97.4 200 40.0
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 4.8e-18 95.9 217 40.6
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 4.8e-18 95.9 165 44.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 1.8e-17 94.0 234 39.3
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.4e-17 93.6 101 64.4
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 5.4e-17 92.4 122 61.5
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 9.1e-17 91.7 172 52.9
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 1.0e-15 88.2 212 40.1
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.3e-15 87.0 149 49.7
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 1.1e-14 84.7 97 53.6
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.8e-13 80.1 208 32.7
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 6.1e-13 79.0 127 44.1
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 4.0e-12 76.3 245 38.4
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 6.8e-12 75.5 201 32.3
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 3.2e-09 66.6 46 60.9
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 2.0e-08 63.9 33 87.9
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 4.5e-08 62.8 65 46.2
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 1.3e-07 61.2 114 36.8
Haze_16651 Corylus avellana HOM05D005915 ORTHO05D007239 5.0e-07 59.3 119 42.0
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 5.0e-07 59.3 57 63.2
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 7.3e-06 55.5 88 43.2
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 7.3e-06 55.5 44 56.8
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 7.3e-06 55.5 66 50.0


User provided reference genes

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