Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 1.1e-63 246.5 124 100.0
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 8.7e-50 200.3 122 84.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 1.8e-42 176.0 161 62.1
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 3.0e-42 175.3 125 76.0
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 4.4e-25 118.2 124 57.3
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 2.2e-24 115.9 126 56.3
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 6.3e-24 114.4 111 62.2
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 5.9e-22 107.8 136 50.7
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 7.7e-22 107.5 125 53.6
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 5.0e-21 104.8 96 58.3
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.5e-20 103.2 127 50.4
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 4.2e-20 101.7 70 68.6
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.6e-19 99.8 98 54.1
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.1e-19 99.4 103 53.4
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.1e-19 99.4 103 53.4
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 2.7e-19 99.0 107 51.4
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 8.0e-19 97.4 121 54.5
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 1.0e-18 97.1 122 48.4
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 1.4e-18 96.7 93 58.1
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.2e-17 93.6 114 49.1
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 1.2e-17 93.6 76 65.8
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 2.6e-17 92.4 111 52.3
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 7.5e-17 90.9 55 76.4
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.3e-16 90.1 80 61.2
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.3e-16 90.1 80 61.2
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 1.3e-16 90.1 112 47.3
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.7e-16 89.7 89 58.4
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.2e-16 89.4 110 49.1
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.8e-16 89.0 110 50.9
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 3.7e-16 88.6 98 55.1
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 4.8e-16 88.2 110 50.0
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 1.4e-15 86.7 80 61.2
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 1.8e-15 86.3 98 50.0
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 1.8e-15 86.3 82 59.8
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 4.1e-15 85.1 105 46.7
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.0e-15 84.3 113 44.2
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 9.1e-15 84.0 113 44.2
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 9.1e-15 84.0 113 44.2
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 2.7e-14 82.4 118 47.5
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 4.5e-14 81.6 100 52.0
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 4.5e-14 81.6 103 47.6
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.3e-13 80.1 76 55.3
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 2.2e-13 79.3 103 43.7
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 2.9e-13 79.0 117 48.7
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 3.8e-13 78.6 80 55.0
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.5e-12 76.6 117 45.3
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 1.9e-12 76.3 113 43.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 3.2e-12 75.5 102 48.0
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 7.2e-12 74.3 121 41.3
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 2.1e-11 72.8 121 40.5
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 2.1e-11 72.8 84 50.0
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.7e-11 72.4 115 44.3
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 3.6e-11 72.0 71 53.5
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 3.6e-11 72.0 134 43.3
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 4.7e-11 71.6 104 49.0
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 6.1e-11 71.2 69 50.7
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.4e-10 70.1 72 51.4
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 1.8e-10 69.7 76 48.7
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 2.3e-10 69.3 61 57.4
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 4.0e-10 68.6 97 45.4
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 5.2e-10 68.2 134 41.8
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 5.7e-09 64.7 35 71.4
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 7.5e-09 64.3 88 48.9
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 9.8e-09 63.9 114 38.6
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 9.8e-09 63.9 117 41.9
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.3e-08 63.5 73 47.9
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 2.8e-08 62.4 113 40.7
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 2.8e-08 62.4 127 40.2
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.8e-08 62.4 76 44.7
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 3.7e-08 62.0 88 44.3
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 1.1e-07 60.5 77 54.5
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 1.1e-07 60.5 67 56.7
Atru.chr1.2985 Acer truncatum HOM05D007722 ORTHO05D009730 5.4e-07 58.2 100 41.0
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 5.4e-07 58.2 115 35.7
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 9.2e-07 57.4 56 50.0
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 1.2e-06 57.0 122 36.1
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 2.0e-06 56.2 94 40.4
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 2.7e-06 55.8 118 39.0
Thhalv10011859m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 4.5e-06 55.1 130 33.1
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 5.9e-06 54.7 119 35.3
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 5.9e-06 54.7 130 35.4


User provided reference genes

Program Settings