Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 1.3e-88 329.7 172 100.0
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 2.2e-59 232.6 173 74.6
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.7e-57 225.7 172 72.1
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 4.6e-41 171.8 177 61.6
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 5.5e-34 148.3 182 54.9
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.5e-33 145.6 179 53.1
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 6.7e-32 141.4 195 49.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.6e-30 136.7 186 49.5
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-29 133.3 133 60.9
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 9.0e-29 131.0 115 65.2
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.4e-28 129.0 186 47.8
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 7.6e-28 127.9 176 53.4
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 2.2e-27 126.3 166 48.8
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 2.2e-27 126.3 187 47.6
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 2.9e-27 125.9 174 48.9
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.8e-27 125.6 174 50.0
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 5.0e-27 125.2 178 47.8
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 5.0e-27 125.2 174 50.6
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.1e-26 124.0 178 48.3
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 1.4e-26 123.6 171 47.4
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 3.2e-26 122.5 189 46.6
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 5.5e-26 121.7 175 45.1
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 5.5e-26 121.7 135 57.8
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 5.5e-26 121.7 135 57.8
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.2e-26 121.3 135 59.3
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 7.2e-26 121.3 172 48.3
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.2e-25 120.6 179 43.6
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.2e-25 120.6 174 50.0
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 2.1e-25 119.8 167 48.5
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 4.6e-25 118.6 182 45.1
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 6.1e-25 118.2 176 51.7
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-25 117.9 104 64.4
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 7.9e-25 117.9 171 47.4
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 3.9e-24 115.5 187 46.0
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.7e-24 114.4 99 65.7
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 8.7e-24 114.4 180 43.3
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 8.7e-24 114.4 194 42.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.5e-23 113.6 172 45.9
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 1.9e-23 113.2 175 43.4
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.3e-23 112.5 133 51.1
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 7.4e-23 111.3 180 41.7
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.7e-22 110.2 185 43.8
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 2.2e-22 109.8 183 42.1
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 2.2e-22 109.8 175 47.4
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 6.3e-22 108.2 173 43.9
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 6.3e-22 108.2 183 41.0
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 6.3e-22 108.2 183 41.0
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 8.2e-22 107.8 176 46.6
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.1e-21 107.5 187 42.2
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.1e-21 107.5 180 47.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.8e-21 106.7 109 54.1
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 2.4e-21 106.3 192 42.2
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.3e-21 105.1 133 48.9
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 6.9e-21 104.8 179 45.8
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 9.1e-21 104.4 177 43.5
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 1.2e-20 104.0 175 42.3
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.2e-20 104.0 184 43.5
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.0e-20 103.2 109 53.2
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 2.6e-20 102.8 177 41.8
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 4.5e-20 102.1 175 41.1
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 7.7e-20 101.3 178 44.9
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 7.7e-20 101.3 181 43.6
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-19 100.5 135 49.6
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 2.9e-19 99.4 187 40.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 3.8e-19 99.0 181 41.4
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.8e-19 99.0 195 40.0
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 3.8e-19 99.0 195 40.0
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 5.0e-19 98.6 128 49.2
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 6.5e-19 98.2 195 39.5
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 6.5e-19 98.2 183 43.2
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 6.5e-19 98.2 170 46.5
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 8.5e-19 97.8 180 41.1
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.1e-18 97.4 176 40.9
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 1.4e-18 97.1 163 42.9
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.4e-18 97.1 171 43.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.4e-18 97.1 181 40.9
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 1.9e-18 96.7 174 41.4
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.5e-18 96.3 181 43.1
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 4.2e-18 95.5 183 42.6
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 4.2e-18 95.5 180 44.4
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 7.2e-18 94.7 176 42.6
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 9.4e-18 94.4 183 41.0
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 9.4e-18 94.4 175 40.0
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.6e-17 93.6 175 40.0
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 2.1e-17 93.2 174 41.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.7e-17 92.8 150 47.3
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 3.6e-17 92.4 178 42.1
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 6.1e-17 91.7 170 40.6
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-17 91.3 125 52.8
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 2.3e-16 89.7 185 42.2
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 3.0e-16 89.4 185 43.2
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 5.1e-16 88.6 169 40.8
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.4e-15 85.5 168 42.3
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 5.7e-15 85.1 154 42.9
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.7e-14 83.6 148 39.9
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 2.8e-14 82.8 127 44.9
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 2.8e-14 82.8 190 38.4
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.1e-13 77.8 165 40.0
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.2e-12 77.4 175 32.6
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 2.6e-12 76.3 175 37.7
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-11 74.3 179 39.7
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 2.9e-11 72.8 105 51.4
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 2.9e-11 72.8 153 38.6
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 8.5e-11 71.2 97 48.5
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 8.0e-09 64.7 172 34.3
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 8.0e-09 64.7 137 38.7
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.4e-08 63.9 163 39.3
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 2.6e-07 59.7 160 36.9
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 3.3e-07 59.3 110 40.0
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 5.7e-07 58.5 140 35.7
FvH4_6g22601 Fragaria vesca HOM05D017723 ORTHO05D035582 7.4e-07 58.2 107 39.3
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 9.7e-07 57.8 95 50.5
FvH4_4g05631 Fragaria vesca HOM05D017723 ORTHO05D007769 1.3e-06 57.4 115 40.9
FAN25G2660 Fragaria x ananassa HOM05D017723 ORTHO05D007769 1.3e-06 57.4 119 39.5
FvH4_1g12841 Fragaria vesca HOM05D017723 ORTHO05D007769 4.8e-06 55.5 58 53.4
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.8e-06 55.5 76 44.7
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 6.3e-06 55.1 183 35.5
FAN14G3105 Fragaria x ananassa HOM05D017723 ORTHO05D035582 8.2e-06 54.7 61 47.5


User provided reference genes

Program Settings