Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 8.9e-84 313.5 156 100.0
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 1.9e-81 305.8 156 96.2
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 2.2e-74 282.3 155 88.4
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 7.1e-73 277.3 155 86.5
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 1.0e-71 273.5 155 85.2
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 1.0e-71 273.5 160 84.4
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 5.1e-71 271.2 160 83.8
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 1.5e-70 269.6 155 83.9
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 1.9e-70 269.2 155 83.9
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 1.6e-69 266.2 151 85.4
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 1.6e-69 266.2 155 82.6
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 3.6e-69 265.0 155 81.3
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 3.6e-69 265.0 155 81.3
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 3.6e-69 265.0 155 84.5
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 3.6e-69 265.0 155 80.6
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 3.6e-69 265.0 155 82.6
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 8.1e-69 263.8 155 83.2
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 1.8e-68 262.7 155 80.6
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 2.4e-68 262.3 153 83.0
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 3.1e-68 261.9 151 84.1
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 3.1e-68 261.9 155 81.9
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 5.2e-68 261.2 151 84.1
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 2.6e-67 258.8 154 81.2
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 4.4e-67 258.1 155 78.7
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 9.9e-67 256.9 155 81.3
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 9.9e-67 256.9 155 80.0
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 9.9e-67 256.9 155 80.6
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.3e-66 256.5 152 79.6
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.3e-66 256.5 152 79.6
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.3e-66 256.5 152 79.6
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.7e-66 256.1 155 80.6
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 1.7e-66 256.1 155 80.6
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 2.9e-66 255.4 155 80.6
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 2.9e-66 255.4 155 79.4
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 2.9e-66 255.4 153 81.0
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 4.9e-66 254.6 155 80.0
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 6.4e-66 254.2 153 79.7
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 6.4e-66 254.2 176 73.3
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 8.4e-66 253.8 179 72.1
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 1.4e-65 253.1 155 79.4
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 1.4e-65 253.1 155 79.4
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 1.9e-65 252.7 155 79.4
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.9e-65 252.7 153 81.0
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 1.9e-65 252.7 155 79.4
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 2.4e-65 252.3 155 77.4
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 2.4e-65 252.3 154 79.9
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 3.2e-65 251.9 155 78.7
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 3.2e-65 251.9 158 80.4
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 3.2e-65 251.9 152 78.3
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 3.2e-65 251.9 155 79.4
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 3.2e-65 251.9 155 78.7
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 4.2e-65 251.5 156 77.6
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 5.4e-65 251.1 156 78.2
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 5.4e-65 251.1 156 80.1
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 5.4e-65 251.1 155 78.7
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 7.1e-65 250.8 154 77.9
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 1.2e-64 250.0 155 77.4
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 1.2e-64 250.0 156 75.6
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.1e-64 249.2 157 78.3
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 2.7e-64 248.8 155 77.4
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 3.5e-64 248.4 158 79.1
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 3.5e-64 248.4 155 78.1
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 3.5e-64 248.4 155 76.8
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 1.3e-63 246.5 160 75.6
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 1.7e-63 246.1 155 77.4
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 2.3e-63 245.7 155 77.4
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 2.3e-63 245.7 156 78.2
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 2.3e-63 245.7 155 76.1
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.0e-63 245.4 155 77.4
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 3.0e-63 245.4 157 75.8
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 3.9e-63 245.0 156 78.8
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 6.6e-63 244.2 148 77.7
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 6.6e-63 244.2 158 76.6
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 6.6e-63 244.2 157 74.5
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.1e-62 243.4 141 83.7
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 1.5e-62 243.0 155 74.2
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.5e-62 243.0 141 84.4
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 2.5e-62 242.3 156 75.0
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 3.3e-62 241.9 158 74.1
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 3.3e-62 241.9 153 76.5
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 5.6e-62 241.1 155 77.4
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 1.6e-61 239.6 154 72.7
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 2.1e-61 239.2 141 83.0
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 2.8e-61 238.8 156 75.0
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 2.8e-61 238.8 154 75.3
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 3.6e-61 238.4 177 68.4
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 4.8e-61 238.0 158 75.3
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 4.8e-61 238.0 155 76.1
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 6.2e-61 237.7 141 82.3
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 1.1e-60 236.9 152 76.3
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.4e-60 236.5 156 71.2
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.4e-60 235.7 141 80.1
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 6.9e-60 234.2 141 79.4
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.5e-59 233.0 153 75.2
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 2.6e-59 232.3 142 76.8
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 3.4e-59 231.9 142 76.1
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 1.3e-58 229.9 156 73.1
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 6.4e-58 227.6 155 72.9
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 6.4e-58 227.6 160 73.8
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 8.4e-58 227.3 146 74.0
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 7.1e-57 224.2 156 66.7
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 9.3e-57 223.8 142 75.4
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 9.3e-57 223.8 160 70.6
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 2.1e-56 222.6 141 75.9
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 2.1e-56 222.6 141 75.9
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 2.1e-56 222.6 141 75.9
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 4.6e-56 221.5 141 75.2
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 4.6e-56 221.5 142 76.1
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 7.9e-56 220.7 142 73.9
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 1.3e-55 219.9 141 75.2
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 1.8e-55 219.5 141 75.2
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 1.8e-55 219.5 141 75.2
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 6.7e-55 217.6 141 73.8
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 6.7e-55 217.6 141 73.8
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 1.9e-54 216.1 160 68.8
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 6.2e-53 211.1 160 67.5
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 9.0e-52 207.2 157 65.0
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 4.5e-51 204.9 132 75.0
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 9.3e-49 197.2 194 54.1
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 1.3e-47 193.4 154 66.2
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 8.7e-47 190.7 152 62.5
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 4.3e-46 188.3 125 69.6
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 9.6e-46 187.2 108 81.5
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 8.4e-42 174.1 93 92.5
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 2.7e-40 169.1 130 60.0
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 3.0e-39 165.6 104 76.0
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 1.0e-34 150.6 154 50.0
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 5.0e-34 148.3 93 75.3
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 1.4e-33 146.7 142 50.0
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 1.7e-29 133.3 87 73.6
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 2.8e-29 132.5 98 68.4
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 2.2e-26 122.9 140 45.7
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 7.2e-25 117.9 73 74.0
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 2.2e-21 106.3 124 47.6
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 4.1e-20 102.1 124 46.0
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 7.4e-14 81.3 48 79.2
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 9.7e-14 80.9 50 78.0


User provided reference genes

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