Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 2.1e-202 708.8 352 100.0
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.1e-185 653.3 346 94.2
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.7e-175 619.4 349 87.4
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 3.8e-175 618.2 349 87.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 5.7e-163 577.8 340 84.7
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.2e-159 565.8 325 84.9
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 6.5e-159 564.3 335 83.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 6.5e-159 564.3 340 82.6
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 9.4e-158 560.5 327 81.7
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.6e-157 558.5 340 81.8
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 6.4e-146 521.2 361 73.4
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.4e-145 518.1 325 77.8
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 3.9e-143 511.9 321 77.3
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 6.2e-141 504.6 336 74.7
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 8.0e-141 504.2 324 75.6
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 3.1e-140 502.3 320 76.6
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.1e-140 502.3 320 76.6
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 4.4e-139 498.4 338 73.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 4.4e-139 498.4 327 73.7
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.7e-138 495.4 332 73.2
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-137 493.8 315 76.5
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.1e-137 493.8 315 75.9
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.4e-137 492.7 321 74.5
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.1e-137 491.9 319 75.5
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.6e-136 490.0 315 76.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.1e-134 483.8 313 77.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.1e-134 483.8 313 77.0
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.7e-133 478.4 313 76.4
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 6.2e-133 478.0 311 74.9
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 6.2e-133 478.0 311 74.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.1e-132 477.2 332 71.4
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.1e-132 477.2 317 73.2
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.4e-132 476.9 315 75.2
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 4.0e-132 475.3 349 69.1
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 8.9e-132 474.2 311 74.3
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.5e-131 473.4 311 74.3
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.0e-131 473.0 313 74.1
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 2.0e-131 473.0 323 72.1
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.6e-131 472.6 314 74.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.6e-131 472.6 315 74.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.4e-131 472.2 328 72.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 5.8e-131 471.5 318 73.3
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 7.5e-131 471.1 324 69.8
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 7.5e-131 471.1 318 73.3
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 7.5e-131 471.1 318 73.3
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.7e-130 469.9 311 73.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.9e-130 469.2 322 71.1
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.1e-129 467.2 313 73.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 7.8e-128 461.1 315 70.2
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.0e-127 460.7 315 69.8
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.0e-127 459.1 313 70.9
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.9e-127 458.8 328 68.9
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.9e-127 458.8 330 68.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 3.9e-127 458.8 314 70.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 5.1e-127 458.4 320 70.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-126 457.2 344 67.7
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 9.5e-126 454.1 318 71.1
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.6e-125 452.2 325 69.5
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 2.6e-123 446.0 310 69.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 4.4e-123 445.3 344 67.2
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 2.2e-122 443.0 333 66.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.4e-121 439.5 344 67.2
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.1e-120 436.4 290 72.4
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 5.1e-119 431.8 311 66.6
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 8.6e-119 431.0 279 76.3
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.1e-118 430.6 319 68.0
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.3e-118 429.1 319 67.4
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.6e-117 426.8 322 66.1
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.8e-117 426.0 322 66.1
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 4.7e-117 425.2 323 64.7
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 6.2e-117 424.9 323 64.4
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 5.2e-116 421.8 322 64.6
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.2e-115 420.6 340 61.5
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.5e-115 420.2 300 68.3
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 4.4e-115 418.7 323 63.8
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.2e-114 416.4 279 73.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.0e-111 407.5 302 69.2
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 3.9e-111 405.6 323 62.2
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 5.1e-111 405.2 313 62.9
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 6.6e-111 404.8 313 62.9
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 8.7e-111 404.4 315 61.9
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.9e-110 403.3 313 63.6
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.5e-110 402.9 323 62.8
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 3.8e-106 389.0 325 60.3
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.2e-104 384.0 253 73.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 8.1e-101 371.3 248 72.6
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 8.1e-101 371.3 322 60.2
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.1e-100 369.4 244 74.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.9e-99 364.4 309 56.3
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 4.6e-96 355.5 290 59.7
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 7.9e-96 354.8 313 58.8
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 1.3e-85 320.9 308 50.6
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 6.3e-85 318.5 331 48.3
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 2.6e-83 313.2 259 58.3
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.2e-81 306.2 312 48.1
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.2e-81 306.2 312 48.1
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-79 300.8 308 49.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.1e-79 298.9 308 47.4
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 4.3e-78 295.8 328 49.4
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.4e-76 290.0 308 47.1
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.1e-76 289.7 224 62.1
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-74 283.9 336 44.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-73 281.2 330 43.3
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.4e-73 280.8 317 45.1
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.0e-67 260.4 317 43.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 3.4e-67 259.6 343 42.6
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.5e-65 253.4 309 48.2
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 3.0e-55 219.9 213 51.2
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.9e-41 174.1 273 38.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 4.4e-30 136.3 107 58.9
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.9e-29 133.7 115 60.0
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 3.1e-07 60.5 40 70.0


User provided reference genes

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