Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 0.0e+00 1094.3 559 100.0
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 1.9e-298 1028.5 562 93.6
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.4e-280 969.1 560 90.5
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 2.2e-241 839.0 575 77.2
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 4.1e-240 834.7 565 77.7
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.2e-236 823.2 568 77.6
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 2.9e-233 812.0 569 75.7
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 7.0e-232 807.4 523 80.1
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 3.0e-230 802.0 504 81.0
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 1.4e-219 766.5 516 78.1
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 1.1e-200 703.7 400 91.0
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 3.2e-200 702.2 522 69.2
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 7.1e-200 701.0 530 69.1
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 9.3e-200 700.7 531 69.1
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 1.2e-199 700.3 505 71.3
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.5e-197 693.3 486 72.6
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.5e-197 693.3 486 72.6
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 1.1e-195 687.2 491 70.3
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 1.8e-195 686.4 487 72.9
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 9.0e-195 684.1 486 71.4
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 2.6e-194 682.6 536 68.3
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 3.4e-194 682.2 497 70.2
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 6.4e-193 677.9 482 70.7
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 1.2e-191 673.7 520 67.5
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 1.6e-191 673.3 522 67.8
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.7e-191 672.5 523 67.5
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.8e-190 669.8 502 67.7
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 3.0e-190 669.1 530 66.8
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.9e-190 668.7 499 69.7
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 6.7e-190 667.9 530 66.8
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 2.5e-189 666.0 488 69.7
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 3.3e-189 665.6 489 70.3
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 3.3e-189 665.6 567 63.3
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 5.6e-189 664.8 549 63.4
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 5.6e-189 664.8 520 66.5
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 3.7e-188 662.1 473 71.0
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 6.2e-188 661.4 497 68.8
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 8.2e-188 661.0 488 69.5
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 1.1e-187 660.6 488 70.7
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.8e-187 659.8 487 69.0
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 9.0e-187 657.5 483 69.6
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 9.0e-187 657.5 537 64.4
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 9.0e-187 657.5 503 67.2
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.0e-186 656.4 492 68.1
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 2.0e-186 656.4 476 70.4
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 4.5e-186 655.2 519 65.7
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 5.8e-186 654.8 476 70.2
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 1.0e-185 654.1 473 70.4
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.0e-185 654.1 488 69.1
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 1.3e-185 653.7 546 63.0
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 4.9e-185 651.7 493 69.8
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 6.5e-185 651.4 555 61.8
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 3.2e-184 649.0 550 62.9
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.2e-183 647.1 502 66.7
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 3.5e-183 645.6 541 64.7
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 2.3e-182 642.9 496 65.3
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 1.9e-181 639.8 532 62.2
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 4.3e-181 638.6 483 67.7
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 4.8e-180 635.2 529 61.8
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 4.8e-180 635.2 568 59.9
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 1.1e-179 634.0 539 61.8
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 1.4e-179 633.6 553 60.9
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.8e-179 633.3 531 61.6
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 2.4e-179 632.9 539 61.8
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 4.1e-179 632.1 484 66.7
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 6.9e-179 631.3 492 67.3
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.6e-178 629.4 544 64.2
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 3.4e-178 629.0 559 60.6
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 3.8e-177 625.5 559 59.7
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 5.0e-177 625.2 556 59.4
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 5.0e-177 625.2 618 57.0
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 6.5e-177 624.8 486 66.7
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 6.5e-177 624.8 519 64.5
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 3.2e-176 622.5 547 62.5
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 5.5e-176 621.7 513 62.4
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 9.4e-176 620.9 540 64.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.6e-175 620.2 515 63.9
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.6e-175 620.2 510 64.5
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 2.7e-175 619.4 566 59.4
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 1.8e-174 616.7 483 65.6
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 2.3e-174 616.3 513 64.7
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.4e-171 606.3 523 63.5
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.1e-171 605.5 575 57.6
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 5.3e-171 605.1 464 68.8
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 3.4e-170 602.4 487 66.3
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 5.0e-169 598.6 483 63.8
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 5.0e-169 598.6 491 61.7
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 1.1e-168 597.4 550 58.5
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 6.7e-166 588.2 547 58.1
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 2.2e-164 583.2 529 60.9
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.0e-161 574.3 508 63.4
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 6.1e-159 565.1 489 62.4
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 3.1e-155 552.7 425 67.3
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 8.0e-151 538.1 546 55.9
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 9.7e-149 531.2 482 62.9
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 1.4e-147 527.3 513 56.9
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.6e-143 513.8 391 69.6
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.6e-138 497.3 423 65.5
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 2.0e-138 496.9 517 52.4
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.5e-138 495.7 536 51.9
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 3.8e-137 492.7 512 57.2
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.5e-136 490.7 386 65.5
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 5.2e-134 482.3 396 62.9
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 1.3e-129 467.6 550 48.4
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 2.2e-124 450.3 393 62.3
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 1.9e-120 437.2 306 72.9
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 5.6e-120 435.6 287 77.4
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 9.5e-120 434.9 484 48.8
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 4.3e-112 409.5 550 44.5
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 1.6e-111 407.5 494 49.4
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.9e-108 396.0 367 59.4
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 4.9e-100 369.4 492 43.3
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 5.1e-97 359.4 325 63.4
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 1.4e-94 351.3 355 52.7
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.1e-91 341.7 266 66.5
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 3.2e-91 340.1 281 66.5
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 3.9e-89 333.2 312 56.4
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 1.1e-88 331.6 558 37.5
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 1.3e-87 328.2 300 59.3
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 6.9e-78 295.8 196 77.6
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 9.0e-78 295.4 311 54.0
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 5.8e-77 292.7 235 64.7
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 1.7e-76 291.2 279 57.7
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 2.9e-76 290.4 258 60.5
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 2.7e-74 283.9 277 56.3
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-68 265.4 289 51.2
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 6.5e-68 262.7 192 71.9
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.8e-63 247.3 191 63.9
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 3.7e-63 246.9 552 32.6
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 7.7e-61 239.2 178 68.0
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 4.2e-59 233.4 243 55.1
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 1.2e-58 231.9 244 53.3
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 4.8e-55 219.9 155 76.1
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.3e-52 211.8 391 36.8
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.6e-50 203.8 371 37.7
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 6.1e-50 203.0 255 46.3
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 4.5e-45 186.8 157 68.8
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 2.9e-44 184.1 147 68.7
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 3.3e-40 170.6 126 70.6
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 4.4e-40 170.2 116 73.3
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.2e-35 152.9 255 38.8
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.2e-35 152.9 239 39.7
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 1.6e-34 151.8 129 57.4
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 3.6e-34 150.6 117 64.1
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 2.3e-33 147.9 150 59.3
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 3.4e-32 144.1 173 46.8
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 4.9e-23 113.6 253 33.6
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 2.3e-20 104.8 133 41.4
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 1.1e-19 102.4 73 68.5
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-19 101.3 73 63.0
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 7.2e-19 99.8 125 41.6
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 8.0e-18 96.3 69 63.8
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 6.8e-17 93.2 59 76.3
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 1.7e-15 88.6 52 86.5
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 2.2e-15 88.2 141 39.0
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 4.1e-14 84.0 61 63.9
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 7.0e-14 83.2 48 91.7
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 8.6e-12 76.3 50 72.0
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 8.6e-12 76.3 70 48.6
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 1.1e-11 75.9 51 72.5
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.9e-11 75.1 83 49.4
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 3.3e-11 74.3 53 64.2
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 3.3e-11 74.3 49 67.3
arahy.Tifrunner.gnm1.ann1.6Z8QT9 Arachis hypogaea HOM05D001329 ORTHO05D010271 3.6e-10 70.9 51 64.7
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 6.2e-10 70.1 51 64.7
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-10 70.1 86 46.5
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 1.5e-08 65.5 132 37.1
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 2.0e-08 65.1 57 50.9
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 4.4e-08 63.9 50 54.0
arahy.Tifrunner.gnm1.ann1.9Y3J9M Arachis hypogaea HOM05D008137 ORTHO05D010271 9.8e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.B8XGRJ Arachis hypogaea HOM05D008137 ORTHO05D010271 9.8e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.VBV8TV Arachis hypogaea HOM05D008137 ORTHO05D010271 9.8e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.YK1T90 Arachis hypogaea HOM05D008137 ORTHO05D010271 9.8e-08 62.8 50 64.0
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 1.3e-07 62.4 138 36.2
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 2.9e-07 61.2 54 51.9


User provided reference genes

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