Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 7.4e-71 270.4 134 100.0
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 7.7e-60 233.8 134 88.1
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 5.9e-52 207.6 130 83.8
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 6.5e-51 204.1 129 82.2
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 9.5e-42 173.7 142 69.7
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.4e-40 169.9 142 69.7
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 9.2e-37 157.1 142 64.1
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 2.0e-36 156.0 142 66.9
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 5.9e-36 154.5 140 65.7
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 1.3e-35 153.3 147 61.9
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 5.0e-35 151.4 147 60.5
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.5e-34 149.8 147 63.3
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.9e-34 149.4 149 58.4
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.9e-34 149.4 149 61.1
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 2.5e-34 149.1 130 66.2
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.3e-34 148.7 146 59.6
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 3.3e-34 148.7 150 60.0
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 4.3e-34 148.3 147 59.9
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 4.3e-34 148.3 146 63.0
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 9.5e-34 147.1 150 58.0
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 9.5e-34 147.1 148 60.1
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 9.5e-34 147.1 148 60.1
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.2e-33 146.7 146 61.6
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.2e-33 146.7 148 59.5
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 4.7e-33 144.8 147 61.2
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 6.2e-33 144.4 146 60.3
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.4e-32 143.3 150 60.7
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 1.4e-32 143.3 142 60.6
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.4e-32 143.3 148 58.8
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.8e-32 142.9 148 58.1
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 5.2e-32 141.4 150 59.3
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 5.2e-32 141.4 169 54.4
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 5.2e-32 141.4 155 54.8
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 5.2e-32 141.4 148 62.2
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 5.2e-32 141.4 148 62.2
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 6.8e-32 141.0 148 61.5
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 8.9e-32 140.6 147 59.2
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 2.0e-31 139.4 150 58.0
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 2.0e-31 139.4 151 58.3
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 2.0e-31 139.4 140 60.7
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 2.6e-31 139.0 149 56.4
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 2.6e-31 139.0 150 58.0
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 2.6e-31 139.0 150 58.7
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.6e-31 139.0 150 58.0
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 2.6e-31 139.0 150 58.7
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 2.6e-31 139.0 149 59.1
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 3.4e-31 138.7 150 58.0
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 4.4e-31 138.3 148 57.4
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 7.5e-31 137.5 138 58.7
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 7.5e-31 137.5 151 55.6
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 1.3e-30 136.7 160 53.1
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.7e-30 136.3 150 58.0
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.7e-30 136.3 150 57.3
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 1.7e-30 136.3 139 59.7
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 2.9e-30 135.6 118 65.3
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 2.9e-30 135.6 150 57.3
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 8.3e-30 134.0 142 52.1
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 8.3e-30 134.0 151 56.3
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.4e-29 133.3 150 57.3
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.9e-29 132.9 147 56.5
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 2.4e-29 132.5 149 55.0
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.2e-29 132.1 144 52.8
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 4.1e-29 131.7 151 57.0
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 4.1e-29 131.7 148 54.7
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 7.0e-29 131.0 154 55.8
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 7.0e-29 131.0 147 55.8
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.2e-28 130.2 149 54.4
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.2e-28 130.2 150 56.7
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 2.7e-28 129.0 95 69.5
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 3.5e-28 128.6 142 56.3
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 4.6e-28 128.3 143 53.1
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 4.6e-28 128.3 148 54.1
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 4.6e-28 128.3 147 56.5
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 7.8e-28 127.5 142 56.3
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.0e-27 127.1 143 55.2
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 1.7e-27 126.3 148 54.1
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.3e-27 125.9 157 51.6
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 2.3e-27 125.9 144 54.9
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 2.3e-27 125.9 144 55.6
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 2.3e-27 125.9 151 53.0
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 3.0e-27 125.6 144 55.6
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 8.6e-27 124.0 148 50.0
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 1.1e-26 123.6 146 54.1
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.5e-26 123.2 160 49.4
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 2.5e-26 122.5 151 51.7
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 3.3e-26 122.1 101 68.3
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 5.6e-26 121.3 145 54.5
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 1.2e-25 120.2 161 50.3
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 1.2e-25 120.2 125 55.2
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.6e-25 119.8 88 68.2
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 8.1e-25 117.5 144 52.1
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 1.1e-24 117.1 168 49.4
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 2.6e-23 112.5 152 48.7
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 7.5e-23 110.9 139 52.5
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 9.8e-23 110.5 142 50.7
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.7e-22 109.8 126 53.2
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.6e-20 103.2 149 44.3
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.1e-20 102.8 152 42.8
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 2.7e-20 102.4 76 69.7
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 2.3e-19 99.4 125 52.8
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 2.5e-18 95.9 130 43.1
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 9.5e-18 94.0 123 51.2
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 9.5e-18 94.0 131 49.6
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 8.9e-16 87.4 124 46.0
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 1.2e-15 87.0 136 49.3
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 2.6e-15 85.9 53 71.7
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 7.6e-15 84.3 137 43.8
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 2.4e-13 79.3 120 43.3
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 5.4e-13 78.2 112 44.6
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 4.6e-12 75.1 111 42.3
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 2.3e-11 72.8 173 39.9
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 2.5e-10 69.3 125 40.0
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 3.3e-10 68.9 56 62.5
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.2e-09 67.0 130 36.9
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 3.6e-09 65.5 53 62.3
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 8.1e-09 64.3 50 68.0
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 2.4e-08 62.8 53 54.7
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 4.0e-08 62.0 42 71.4
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 1.5e-07 60.1 33 81.8
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 2.0e-07 59.7 51 56.9
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 2.2e-06 56.2 91 41.8


User provided reference genes

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