Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G130100 Phaseolus vulgaris HOM05D008345 ORTHO05D010179 2.6e-62 242.3 162 100.0
VMungo0331G1836 Vigna mungo HOM05D008345 ORTHO05D010179 7.4e-33 144.4 165 72.7
Glyma.16G007500 Glycine max HOM05D008345 ORTHO05D010179 2.4e-23 112.8 175 61.7
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 4.7e-19 98.6 163 63.2
Medtr8g020530 Medicago truncatula HOM05D008345 ORTHO05D010179 2.2e-16 89.7 170 54.1
Ca_23374_v3 Cicer arietinum L. HOM05D008345 ORTHO05D010179 8.3e-16 87.8 162 50.0
TPR.G32503 Trifolium pratense HOM05D008345 ORTHO05D010179 1.4e-15 87.0 163 49.7
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 9.5e-12 74.3 68 66.2
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 2.1e-11 73.2 80 55.0
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 4.7e-11 72.0 47 83.0
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 4.7e-11 72.0 47 83.0
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 4.7e-11 72.0 45 84.4
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 1.8e-10 70.1 94 48.9
Manes.04G144600 Manihot esculenta HOM05D008345 ORTHO05D010179 5.2e-10 68.6 46 73.9
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 5.2e-10 68.6 46 73.9
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 1.5e-09 67.0 46 71.7
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.5e-09 67.0 47 70.2
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 2.0e-09 66.6 45 73.3
Sabra01G0141900 Salix brachista HOM05D008345 ORTHO05D010179 2.0e-09 66.6 45 75.6
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 4.4e-09 65.5 79 51.9
Lalb_Chr04g0263511 Lupinus albus HOM05D008345 ORTHO05D010179 5.7e-09 65.1 154 58.4
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 7.5e-09 64.7 46 69.6
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.3e-08 63.9 44 70.5
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.3e-08 63.9 44 70.5
COL.COLO4_30757 Corchorus olitorius HOM05D008345 ORTHO05D010179 2.2e-08 63.2 46 69.6
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 2.8e-08 62.8 168 34.5
Thecc.06G120000 Theobroma cacao HOM05D008345 ORTHO05D010179 4.9e-08 62.0 46 69.6
TWI31G0115 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.4e-07 60.5 36 77.8
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 1.8e-07 60.1 41 75.6
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 2.4e-07 59.7 36 80.6
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 5.4e-07 58.5 46 67.4
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 5.4e-07 58.5 46 67.4
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 7.0e-07 58.2 46 67.4
Gohir.A05G140100 Gossypium hirsutum HOM05D008345 ORTHO05D010179 7.0e-07 58.2 46 65.2
Gorai.009G146400 Gossypium raimondii HOM05D008345 ORTHO05D010179 7.0e-07 58.2 46 65.2
CiPaw.02G135800 Carya illinoinensis HOM05D008345 ORTHO05D010179 9.2e-07 57.8 34 82.4
Atru.chr1.3940 Acer truncatum HOM05D008345 ORTHO05D010179 1.2e-06 57.4 62 54.8
Gohir.D05G142400 Gossypium hirsutum HOM05D008345 ORTHO05D010179 1.2e-06 57.4 46 65.2
Duzib235G0194 Durio zibethinus HOM05D008345 ORTHO05D010179 1.6e-06 57.0 46 63.0
Actinidia21788 Actinidia chinensis HOM05D008345 ORTHO05D010179 2.7e-06 56.2 38 63.2
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 2.7e-06 56.2 36 69.4
Peaxi162Scf00207g01425 Petunia axillaris HOM05D002498 ORTHO05D002553 4.5e-06 55.5 38 65.8
Lalb_Chr01g0013621 Lupinus albus HOM05D008345 ORTHO05D010179 5.9e-06 55.1 167 52.1
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 5.9e-06 55.1 47 59.6


User provided reference genes

Program Settings