Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.0e-69 265.8 148 100.0
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 3.1e-62 241.9 148 85.1
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.6e-53 213.0 150 76.0
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 8.8e-49 197.2 148 70.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 2.6e-48 195.7 149 76.5
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 6.3e-47 191.0 152 66.4
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.8e-46 189.5 151 74.2
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 2.4e-46 189.1 151 74.8
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 5.5e-43 177.9 143 62.2
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 7.2e-43 177.6 155 69.7
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 7.2e-43 177.6 149 63.8
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.1e-42 176.0 125 70.4
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 2.8e-42 175.6 122 69.7
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 8.0e-42 174.1 122 71.3
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.4e-41 173.3 157 68.2
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 5.2e-41 171.4 149 62.4
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.0e-40 169.5 152 60.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 5.7e-40 167.9 157 56.7
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 7.5e-40 167.5 152 56.6
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.3e-39 166.8 149 59.7
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.7e-39 166.4 147 57.8
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 3.7e-39 165.2 148 58.1
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.7e-39 165.2 151 57.0
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 6.3e-39 164.5 127 63.8
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 8.3e-39 164.1 128 66.4
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.8e-38 162.9 151 58.3
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.1e-38 162.2 118 66.1
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 3.1e-38 162.2 160 54.4
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 3.1e-38 162.2 158 55.7
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 3.1e-38 162.2 150 56.0
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 4.1e-38 161.8 124 64.5
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 4.1e-38 161.8 144 57.6
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 4.1e-38 161.8 120 65.0
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 4.1e-38 161.8 154 56.5
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 5.4e-38 161.4 129 62.0
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 5.4e-38 161.4 149 58.4
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 5.4e-38 161.4 145 57.2
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 9.2e-38 160.6 160 53.8
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 9.2e-38 160.6 146 60.3
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.2e-37 160.2 147 59.9
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.6e-37 159.8 150 56.7
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.6e-37 159.8 149 57.0
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 2.0e-37 159.5 149 56.4
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.5e-37 158.7 123 63.4
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 7.8e-37 157.5 149 55.7
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.0e-36 157.1 153 56.2
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.3e-36 156.8 155 54.2
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.3e-36 156.8 122 60.7
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.9e-36 155.6 122 62.3
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 5.0e-36 154.8 143 57.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 8.6e-36 154.1 147 57.8
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.1e-35 153.7 117 65.8
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 1.5e-35 153.3 89 83.1
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.5e-35 153.3 117 65.0
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 2.5e-35 152.5 148 55.4
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 4.3e-35 151.8 111 63.1
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 5.6e-35 151.4 161 57.8
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 5.6e-35 151.4 124 61.3
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 7.3e-35 151.0 130 62.3
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.2e-34 150.2 128 62.5
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 2.1e-34 149.4 144 52.1
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 2.1e-34 149.4 144 52.1
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.1e-34 149.4 129 61.2
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.1e-34 149.4 129 61.2
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 3.6e-34 148.7 156 53.8
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.7e-34 148.3 146 54.8
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 4.7e-34 148.3 129 60.5
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 6.1e-34 147.9 118 61.0
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 1.4e-33 146.7 126 62.7
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.4e-33 146.7 115 62.6
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.8e-33 146.4 152 53.9
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 6.8e-33 144.4 149 55.0
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 6.8e-33 144.4 136 55.9
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 8.9e-33 144.1 130 58.5
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 8.9e-33 144.1 130 58.5
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.5e-32 143.3 114 61.4
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.6e-32 142.5 105 64.8
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.4e-32 142.1 120 60.8
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.4e-32 141.7 150 49.3
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 7.5e-32 141.0 130 57.7
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 7.5e-32 141.0 130 57.7
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.3e-31 140.2 144 52.8
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.7e-31 139.8 121 57.0
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.2e-31 139.4 120 60.0
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 2.9e-31 139.0 114 60.5
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.9e-31 139.0 120 59.2
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 3.7e-31 138.7 97 69.1
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 4.9e-31 138.3 129 55.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 8.3e-31 137.5 112 56.2
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.1e-30 137.1 95 66.3
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.9e-30 136.3 102 65.7
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 7.0e-30 134.4 118 55.1
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 9.2e-30 134.0 152 51.3
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 1.2e-29 133.7 106 63.2
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.6e-29 133.3 108 63.9
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 6.0e-29 131.3 109 56.9
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.3e-28 130.2 124 52.4
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 6.6e-28 127.9 95 58.9
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.1e-27 127.1 98 62.2
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 1.5e-27 126.7 127 55.1
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 3.4e-24 115.5 113 52.2
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.4e-23 111.3 101 51.5
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.0e-20 102.4 100 51.0
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 6.2e-18 94.7 111 44.1
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.2e-16 90.5 72 61.1
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.9e-15 85.1 88 53.4
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.5e-11 73.6 86 46.5
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 2.8e-10 69.3 97 39.2
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.1e-09 67.4 93 34.4
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.4e-09 67.0 93 38.7
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 7.6e-08 61.2 51 49.0


User provided reference genes

Program Settings