Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 7.6e-92 340.5 174 100.0
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 8.4e-91 337.0 174 98.9
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 1.1e-90 336.7 174 98.3
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 3.5e-89 331.6 174 96.0
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 1.0e-88 330.1 174 95.4
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 7.6e-84 313.9 174 88.5
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 1.3e-83 313.2 174 88.5
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 1.7e-83 312.8 174 90.2
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 4.6e-81 304.7 174 85.6
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 1.5e-79 299.7 175 84.6
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 1.5e-79 299.7 174 84.5
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 2.1e-78 295.8 175 84.0
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 2.1e-78 295.8 174 84.5
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 6.2e-78 294.3 174 84.5
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 8.2e-78 293.9 174 83.3
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 1.1e-77 293.5 198 77.8
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 2.4e-77 292.4 174 82.8
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 3.1e-77 292.0 174 82.2
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 3.1e-77 292.0 174 82.8
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 4.0e-77 291.6 174 82.8
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 6.9e-77 290.8 174 82.2
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 2.0e-76 289.3 174 81.6
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 2.6e-76 288.9 174 81.6
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 1.7e-75 286.2 174 81.6
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 1.7e-75 286.2 174 81.0
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 2.2e-75 285.8 174 79.9
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.2e-75 285.8 174 79.9
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.9e-75 285.4 174 80.5
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 2.9e-75 285.4 174 80.5
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 4.9e-75 284.6 174 79.9
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 1.9e-74 282.7 174 79.3
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.9e-74 282.7 194 76.8
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.5e-74 282.3 174 79.9
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 3.2e-74 282.0 174 79.9
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 9.3e-74 280.4 174 81.6
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 3.5e-73 278.5 174 79.3
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 7.9e-73 277.3 174 79.3
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.0e-72 276.9 174 78.2
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.3e-72 276.6 174 77.6
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 5.1e-72 274.6 174 79.3
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 6.7e-72 274.2 174 77.6
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 1.5e-71 273.1 174 77.6
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 1.9e-71 272.7 174 75.9
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 5.7e-71 271.2 174 77.0
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 2.2e-70 269.2 174 74.7
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 73.6
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 73.6
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 73.6
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 73.6
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 73.6
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 4.8e-70 268.1 174 73.6
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 6.3e-70 267.7 174 74.7
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.2e-70 267.3 174 76.4
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.4e-69 266.5 174 75.3
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.8e-69 266.2 174 73.0
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.4e-69 265.8 174 74.1
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 3.1e-69 265.4 174 77.0
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 5.3e-69 264.6 174 73.0
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 2.0e-68 262.7 174 73.6
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 2.0e-68 262.7 174 75.9
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 2.0e-68 262.7 174 74.7
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 2.6e-68 262.3 174 74.1
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 5.9e-68 261.2 174 73.6
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 7.6e-68 260.8 174 72.4
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 7.6e-68 260.8 174 71.3
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 1.0e-67 260.4 174 71.8
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.3e-67 260.0 174 74.7
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 1.3e-67 260.0 171 74.9
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 1.7e-67 259.6 174 71.8
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 2.2e-67 259.2 173 71.7
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 2.9e-67 258.8 174 73.0
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 74.1
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 73.6
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 71.8
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 73.0
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 73.0
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 73.6
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 1.6e-65 253.1 158 78.5
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.0e-64 250.4 171 71.3
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 71.8
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 2.3e-64 249.2 174 70.1
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 3.9e-64 248.4 164 71.3
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 71.3
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 70.1
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.1e-63 246.9 143 80.4
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 1.5e-63 246.5 164 70.7
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.5e-63 246.5 156 75.6
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 71.3
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 71.3
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 70.7
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 72.4
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 70.1
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 9.7e-63 243.8 146 82.2
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 3.7e-62 241.9 171 69.6
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 1.4e-61 240.0 173 69.4
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 2.4e-61 239.2 174 70.7
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 69.0
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.3e-59 233.4 174 67.8
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 1.4e-58 229.9 151 69.5
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 69.0
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 9.4e-58 227.3 175 66.3
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 4.7e-57 224.9 174 68.4
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 63.8
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 7.9e-57 224.2 147 76.9
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 4.4e-55 218.4 174 63.8
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 63.8
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 9.7e-55 217.2 174 64.9
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 1.7e-54 216.5 174 64.4
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 2.2e-54 216.1 122 83.6
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 6.3e-54 214.5 196 57.1
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 1.8e-53 213.0 176 65.3
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.2e-51 206.1 122 78.7
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 2.9e-51 205.7 122 77.0
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 8.5e-51 204.1 171 60.8
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.1e-50 203.8 171 60.8
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 3.6e-49 198.7 239 46.9
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 2.0e-47 193.0 171 57.3
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.6e-47 192.6 190 56.8
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 3.1e-45 185.7 175 55.4
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 4.7e-41 171.8 174 52.3
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 6.1e-41 171.4 176 52.8
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 5.2e-40 168.3 95 81.1
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 1.2e-39 167.2 173 54.9
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 9.7e-39 164.1 94 79.8
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 3.1e-37 159.1 173 46.2
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 3.1e-37 159.1 94 77.7
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 2.7e-36 156.0 93 75.3
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 7.7e-28 127.9 85 65.9
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.2e-25 120.6 96 53.1
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 4.7e-25 118.6 127 53.5
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 4.0e-24 115.5 81 65.4
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 2.6e-23 112.8 75 64.0
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 7.0e-21 104.8 170 36.5
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 2.0e-20 103.2 85 62.4
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 2.1e-17 93.2 175 32.0
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.8e-17 92.8 55 70.9
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.0e-17 91.3 53 75.5
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.9e-16 87.8 48 79.2
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.1e-13 80.9 94 50.0
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 3.9e-11 72.4 175 31.4
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 5.0e-11 72.0 38 78.9
Sp4g02835 Schrenkiella parvula HOM05D005031 ORTHO05D006098 1.3e-06 57.4 162 31.5


User provided reference genes

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