Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 4.7e-45 184.1 90 100.0
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.9e-31 137.9 92 75.0
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 3.9e-15 84.7 82 53.7
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.2e-13 79.7 88 51.1
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 1.2e-13 79.7 79 54.4
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.2e-13 79.7 85 50.6
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.6e-13 79.3 88 51.1
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 2.1e-13 79.0 74 55.4
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 3.6e-13 78.2 93 47.3
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 4.7e-13 77.8 79 49.4
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 8.1e-13 77.0 80 48.8
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 1.4e-12 76.3 84 50.0
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.8e-12 75.9 88 46.6
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 2.4e-12 75.5 91 45.1
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 2.4e-12 75.5 91 51.6
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 3.1e-12 75.1 78 46.2
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.3e-12 74.3 95 45.3
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 6.9e-12 73.9 95 45.3
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 6.9e-12 73.9 85 44.7
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 6.9e-12 73.9 77 48.1
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 6.9e-12 73.9 78 47.4
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 9.0e-12 73.6 85 45.9
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.5e-11 72.8 95 44.2
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 2.0e-11 72.4 92 43.5
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 3.4e-11 71.6 84 50.0
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 5.8e-11 70.9 79 43.0
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 5.8e-11 70.9 82 43.9
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 1.3e-10 69.7 84 42.9
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 1.3e-10 69.7 81 48.1
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 1.7e-10 69.3 87 41.4
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 1.7e-10 69.3 85 41.2
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.7e-10 69.3 88 40.9
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 2.2e-10 68.9 90 44.4
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 2.2e-10 68.9 97 42.3
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 2.9e-10 68.6 52 63.5
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 3.8e-10 68.2 99 40.4
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 4.9e-10 67.8 88 40.9
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.9e-09 65.9 100 41.0
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 2.4e-09 65.5 61 54.1
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 2.4e-09 65.5 95 40.0
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 3.2e-09 65.1 55 60.0
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.2e-09 64.7 77 44.2
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 7.1e-09 63.9 86 44.2
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 9.3e-09 63.5 71 46.5
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.7e-08 62.0 49 59.2
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 2.7e-08 62.0 81 42.0
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 3.5e-08 61.6 41 65.9
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 4.6e-08 61.2 91 40.7
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.0e-07 60.1 75 44.0
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 1.0e-07 60.1 44 61.4
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.3e-07 59.7 82 41.5
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 2.3e-07 58.9 32 75.0
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 2.3e-07 58.9 72 43.1
SEGI_22804 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 5.1e-07 57.8 42 59.5
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 8.7e-07 57.0 50 48.0
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.9e-06 55.8 84 38.1
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 4.3e-06 54.7 35 62.9
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 4.3e-06 54.7 74 36.5
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 9.6e-06 53.5 82 36.6
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 9.6e-06 53.5 36 63.9


User provided reference genes

Program Settings