Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 1.5e-89 332.8 167 100.0
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 2.1e-78 295.8 167 91.0
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 9.3e-71 270.4 167 82.6
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 4.3e-52 208.4 167 68.3
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 6.2e-51 204.5 168 69.0
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 1.4e-42 176.8 165 64.2
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 3.8e-40 168.7 165 58.2
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 8.8e-37 157.5 168 59.5
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 3.4e-33 145.6 176 54.0
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 1.0e-32 144.1 174 54.0
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 1.1e-31 140.6 176 52.8
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 2.8e-27 125.9 169 49.1
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 3.7e-27 125.6 171 47.4
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 8.2e-27 124.4 167 43.7
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 4.1e-26 122.1 167 44.9
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 1.2e-25 120.6 168 47.0
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 4.5e-25 118.6 170 48.2
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 4.5e-25 118.6 169 45.6
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 5.9e-25 118.2 168 45.2
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 5.9e-25 118.2 168 45.2
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.7e-24 116.7 171 47.4
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 8.5e-24 114.4 170 47.6
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 1.4e-23 113.6 169 46.2
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 2.5e-23 112.8 167 44.3
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.2e-23 112.1 170 45.9
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 4.2e-23 112.1 170 45.9
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 5.5e-23 111.7 170 46.5
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 7.2e-23 111.3 170 45.9
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 1.2e-22 110.5 154 47.4
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 1.6e-22 110.2 158 46.2
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 3.6e-22 109.0 168 43.5
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 1.0e-21 107.5 172 44.8
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 2.3e-21 106.3 172 44.8
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 3.9e-21 105.5 167 42.5
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 3.9e-21 105.5 170 43.5
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 3.9e-21 105.5 168 41.7
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 5.2e-21 105.1 168 43.5
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 1.5e-20 103.6 170 41.8
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 7.4e-20 101.3 146 46.6
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 9.7e-20 100.9 169 44.4
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 1.3e-19 100.5 168 42.9
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.3e-19 100.5 168 42.9
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.3e-19 100.5 168 42.9
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 1.7e-19 100.1 163 46.0
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 8.2e-19 97.8 170 41.8
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 8.2e-19 97.8 166 40.4
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 8.2e-19 97.8 154 46.8
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.1e-18 97.4 166 41.0
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 1.8e-18 96.7 154 43.5
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 2.4e-18 96.3 166 42.2
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 2.4e-18 96.3 178 41.0
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 2.4e-18 96.3 154 42.2
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 9.1e-18 94.4 168 40.5
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 2.0e-17 93.2 142 45.1
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 3.5e-17 92.4 167 40.7
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 5.9e-17 91.7 175 41.1
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 5.0e-16 88.6 173 40.5
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 8.5e-16 87.8 175 39.4
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 1.9e-15 86.7 173 39.9
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 2.1e-14 83.2 173 41.6
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 6.1e-14 81.6 167 37.7
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 1.0e-13 80.9 171 39.2
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 8.8e-13 77.8 173 39.3
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 1.5e-12 77.0 167 37.7
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.5e-12 77.0 174 36.8
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 2.0e-12 76.6 172 37.2
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 3.7e-11 72.4 150 40.7
DCAR_022641 Daucus carota HOM05D008031 ORTHO05D010063 3.1e-10 69.3 160 36.9
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 4.1e-10 68.9 172 38.4
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 4.1e-10 68.9 172 37.2
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 5.3e-10 68.6 152 38.2
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 1.2e-09 67.4 108 41.7
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 5.9e-09 65.1 173 34.1
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 2.9e-08 62.8 162 34.0
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 5.0e-08 62.0 185 31.4
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 8.5e-08 61.2 173 36.4
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 8.5e-08 61.2 181 33.1
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 1.1e-07 60.8 184 32.6
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 1.9e-07 60.1 181 33.7
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 2.5e-07 59.7 178 33.1
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 4.2e-07 58.9 179 34.6
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 7.2e-07 58.2 185 32.4
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 7.2e-07 58.2 182 34.1
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 9.4e-07 57.8 172 34.3
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 1.2e-06 57.4 189 32.3
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 1.6e-06 57.0 160 33.8
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 1.6e-06 57.0 159 34.6
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 2.1e-06 56.6 192 34.4
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.7e-06 56.2 183 30.1
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 2.7e-06 56.2 180 30.6
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 2.7e-06 56.2 195 31.3
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 3.6e-06 55.8 176 30.7
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 3.6e-06 55.8 173 31.2
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 3.6e-06 55.8 188 33.0
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 3.6e-06 55.8 189 29.1
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 4.7e-06 55.5 187 31.6
PSO407G0003 Papaver somniferum HOM05D005099 ORTHO05D006087 6.1e-06 55.1 185 33.5
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 8.0e-06 54.7 187 29.4


User provided reference genes

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