Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 0.0e+00 1227.2 634 100.0
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 0.0e+00 1145.6 636 93.9
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 0.0e+00 1106.3 636 91.5
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 0.0e+00 1098.6 634 90.7
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.9e-268 927.2 650 78.2
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.9e-268 927.2 650 78.2
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 8.5e-266 920.2 644 77.6
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 6.3e-261 904.0 646 76.8
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 6.9e-260 900.6 650 76.0
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-255 885.9 645 76.1
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.6e-254 882.1 638 76.0
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.7e-250 869.4 682 71.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.4e-249 866.3 682 71.7
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 6.1e-248 860.9 662 73.3
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.8e-215 753.1 609 67.7
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 5.2e-215 751.5 647 64.5
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.2e-211 740.3 651 62.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 2.5e-209 732.6 653 60.8
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 9.5e-209 730.7 646 62.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 6.2e-208 728.0 642 63.7
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 5.8e-206 721.5 639 64.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.9e-205 719.2 627 63.6
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 3.7e-205 718.8 660 60.8
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 3.7e-205 718.8 651 63.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 8.3e-205 717.6 589 65.5
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 6.0e-203 711.4 649 61.9
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 6.0e-203 711.4 632 63.1
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.5e-201 706.8 647 60.1
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 5.6e-201 704.9 624 63.8
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.6e-200 703.4 654 61.9
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.1e-200 703.0 644 59.8
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 6.2e-200 701.4 647 62.9
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.1e-199 700.7 643 59.3
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.8e-199 699.9 654 61.8
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.8e-199 699.9 652 59.2
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.6e-198 696.0 640 60.2
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 3.7e-197 692.2 648 59.7
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.4e-196 689.5 640 59.2
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.4e-196 689.5 643 60.7
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 7.8e-195 684.5 645 60.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.5e-193 680.2 636 59.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 4.3e-193 678.7 654 57.3
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 4.7e-192 675.2 643 58.5
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.0e-191 672.2 521 65.3
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 2.0e-190 669.8 651 57.1
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 7.6e-190 667.9 691 56.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.6e-187 660.2 652 56.7
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.0e-186 657.5 641 58.2
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 2.3e-186 656.4 643 56.8
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.0e-186 656.0 651 55.0
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.6e-186 654.8 635 57.8
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-185 653.7 637 57.8
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 2.5e-185 652.9 636 57.9
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 9.6e-185 651.0 658 55.5
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 2.8e-184 649.4 654 56.4
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.8e-183 646.7 639 57.6
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 4.0e-183 645.6 659 56.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 4.0e-183 645.6 637 56.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.0e-182 643.3 640 55.8
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 2.6e-182 642.9 630 55.6
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.6e-182 642.9 636 57.1
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.4e-182 642.5 644 57.3
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 5.8e-182 641.7 630 56.2
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 7.6e-182 641.3 634 56.2
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.7e-181 640.2 641 55.5
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.9e-181 639.4 641 54.8
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.8e-181 639.0 633 54.5
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 3.8e-181 639.0 645 56.4
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.9e-180 636.7 652 55.2
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 4.2e-180 635.6 646 56.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.2e-180 635.6 655 54.7
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-180 634.8 608 56.7
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-180 634.8 608 56.7
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 9.3e-180 634.4 606 57.1
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-179 634.0 645 57.1
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.6e-179 633.6 650 55.8
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.6e-179 632.1 653 55.0
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 6.0e-179 631.7 657 54.3
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.0e-178 630.9 641 55.5
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.3e-178 630.6 644 54.7
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.7e-178 630.2 639 55.9
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.3e-178 629.8 644 54.5
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 3.0e-178 629.4 644 55.7
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 5.1e-178 628.6 635 55.6
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 5.3e-175 618.6 642 54.5
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 3.8e-173 612.5 431 68.9
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 2.4e-172 609.8 655 53.4
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 5.4e-172 608.6 644 51.7
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.8e-170 603.6 636 53.1
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 6.7e-170 601.7 642 53.6
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 4.0e-167 592.4 647 53.9
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.3e-165 587.4 624 53.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.7e-165 587.0 647 53.2
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-164 583.9 469 62.5
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 7.9e-163 578.2 637 52.4
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.1e-159 567.8 548 58.6
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 5.1e-154 548.9 633 50.9
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.4e-146 524.2 401 63.8
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.9e-141 506.5 354 69.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 4.4e-137 492.7 644 48.6
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.7e-133 480.7 351 66.7
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.3e-120 438.0 635 41.4
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.7e-117 427.6 526 45.4
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 3.8e-117 426.4 545 45.0
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 6.1e-115 419.1 620 42.7
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 2.0e-110 404.1 510 43.7
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 2.7e-110 403.7 527 43.1
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 7.6e-81 305.8 560 34.6
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.9e-79 301.2 576 31.9
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.1e-62 244.6 468 31.8
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 5.3e-50 203.4 537 28.5
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.1e-36 159.1 420 28.8
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 4.8e-27 127.1 98 59.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 4.8e-27 127.1 98 59.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 2.6e-25 121.3 98 57.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.1e-18 96.3 425 25.4


User provided reference genes

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