Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 3.2e-189 664.8 319 100.0
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.4e-176 622.9 319 92.5
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 5.4e-160 567.8 320 83.1
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 7.0e-160 567.4 320 83.4
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.1e-149 533.5 299 82.6
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 4.9e-145 518.1 293 82.3
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 9.2e-144 513.8 319 75.5
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 3.6e-140 501.9 319 73.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 3.7e-137 491.9 274 81.4
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.5e-130 469.9 299 71.2
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.5e-130 469.9 299 71.2
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.0e-130 469.5 301 71.4
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 4.4e-130 468.4 300 72.0
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.3e-129 466.8 301 69.4
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.3e-129 466.8 301 71.1
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 3.7e-129 465.3 319 69.3
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 1.1e-128 463.8 300 70.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 1.9e-128 463.0 301 71.4
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 2.4e-128 462.6 301 69.4
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 3.2e-128 462.2 301 68.4
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 3.2e-128 462.2 319 69.6
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 3.5e-127 458.8 301 70.4
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.3e-126 456.1 310 70.3
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 3.0e-126 455.7 304 66.8
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.1e-125 453.8 301 67.1
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 2.5e-125 452.6 322 66.8
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 9.6e-125 450.7 331 66.8
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.1e-124 449.5 323 66.6
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.1e-124 449.5 320 67.5
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.7e-124 448.4 325 65.8
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.1e-123 447.2 302 67.2
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.8e-123 446.4 323 66.6
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.1e-123 445.7 323 66.3
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.1e-123 445.7 323 66.6
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 8.9e-123 444.1 317 65.3
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.5e-122 443.4 323 66.3
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 2.6e-122 442.6 301 67.8
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 3.4e-122 442.2 317 65.3
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.4e-122 441.8 301 64.8
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 9.9e-122 440.7 317 65.0
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.2e-121 439.5 273 71.4
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 4.9e-121 438.3 316 67.1
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.9e-121 438.3 270 72.6
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 9.3e-120 434.1 301 66.1
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.7e-119 432.6 301 66.4
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.6e-119 431.8 303 63.0
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.0e-118 430.6 312 65.7
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.3e-118 430.3 273 71.4
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 1.5e-117 426.8 305 63.9
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.9e-117 426.4 302 62.3
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 3.3e-117 425.6 282 70.6
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 3.3e-117 425.6 302 65.2
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 6.2e-116 421.4 302 63.6
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 1.4e-115 420.2 275 68.4
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 5.3e-115 418.3 271 69.7
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.6e-114 416.0 319 63.6
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.3e-113 413.7 293 64.8
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.7e-113 413.3 322 59.6
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.2e-113 412.9 301 62.5
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 3.8e-113 412.1 293 63.8
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 4.9e-113 411.8 293 65.2
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.9e-112 409.8 293 64.2
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.2e-111 407.1 302 64.9
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.3e-110 403.7 278 69.1
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.3e-110 403.7 318 59.7
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.9e-109 399.8 302 60.9
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 3.3e-109 399.1 323 61.9
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 1.3e-108 397.1 333 57.7
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.6e-108 396.7 280 63.9
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 2.1e-108 396.4 280 64.6
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.8e-108 396.0 293 61.8
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 6.2e-108 394.8 270 64.8
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 2.4e-107 392.9 304 59.9
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.5e-106 390.2 306 61.8
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 9.9e-106 387.5 324 57.7
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.3e-105 387.1 189 97.4
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 2.9e-105 386.0 303 60.7
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 1.1e-104 384.0 273 62.3
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 5.4e-104 381.7 293 61.8
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 2.1e-103 379.8 299 57.5
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.0e-102 377.5 263 66.9
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 1.0e-102 377.5 284 63.0
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 5.6e-101 371.7 270 63.7
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 1.7e-97 360.1 244 65.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 1.9e-93 346.7 275 60.0
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 6.2e-92 341.7 190 83.7
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 8.2e-92 341.3 333 55.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 1.4e-91 340.5 239 66.9
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.0e-90 336.7 297 55.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 2.6e-90 336.3 329 50.8
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 3.8e-89 332.4 336 49.4
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.6e-87 327.0 213 70.0
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 7.9e-87 324.7 294 54.1
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 8.7e-86 321.2 229 63.3
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.2e-82 310.8 275 55.6
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.3e-81 307.4 273 55.3
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 1.7e-81 307.0 292 53.4
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 2.5e-80 303.1 276 53.6
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.5e-77 293.9 190 72.1
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 4.3e-77 292.4 190 69.5
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 5.7e-77 292.0 254 55.9
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 6.3e-76 288.5 296 49.7
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.5e-73 278.5 272 49.3
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 8.5e-73 278.1 207 69.1
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 4.2e-72 275.8 179 68.7
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.9e-70 269.2 313 45.7
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.9e-65 253.1 294 45.6
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 5.5e-64 248.8 246 46.7
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 4.7e-63 245.7 320 40.9
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 2.6e-61 240.0 126 87.3
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.3e-60 237.7 190 61.1
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.7e-60 236.1 188 59.6
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 8.2e-60 235.0 129 86.8
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.1e-59 233.0 281 44.5
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 4.2e-56 222.6 283 43.5
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 6.8e-54 215.3 192 53.6
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 6.8e-54 215.3 183 55.2
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 7.7e-50 201.8 367 31.6
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 2.2e-49 200.3 309 33.7
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.5e-49 198.7 117 78.6
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 1.5e-48 197.6 279 37.6
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 7.2e-48 195.3 117 78.6
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.3e-46 190.3 271 40.6
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.3e-44 182.2 134 64.9
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.5e-40 170.2 127 59.1
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 3.3e-40 169.9 220 42.7
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.6e-39 167.5 119 63.9
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 2.1e-39 167.2 104 70.2
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 2.8e-39 166.8 123 63.4
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 4.7e-39 166.0 119 62.2
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.3e-36 157.9 164 51.8
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 2.2e-36 157.1 268 33.2
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.1e-31 140.6 119 52.1
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 4.1e-27 126.3 159 40.9
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.0e-26 124.0 94 60.6
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 4.6e-26 122.9 64 89.1
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 1.7e-20 104.4 182 36.8
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.2e-20 104.0 82 56.1
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 4.6e-18 96.3 73 60.3
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.0e-17 93.6 64 62.5
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 4.3e-16 89.7 65 66.2
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 2.1e-15 87.4 59 55.9
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 3.6e-15 86.7 61 65.6
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 6.0e-10 69.3 154 29.9
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 7.8e-10 68.9 74 43.2
PSO210G5020 Papaver somniferum HOM05D001459 ORTHO05D003498 1.9e-08 64.3 52 53.8
Lj1g0015259 Lotus japonicus HOM05D000590 ORTHO05D006825 4.3e-08 63.2 36 80.6
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 6.2e-07 59.3 44 56.8


User provided reference genes

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