Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.2e-76 288.9 147 100.0
Phvul.004G091794 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 5.3e-46 188.0 99 92.9
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.6e-40 169.1 146 58.2
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 3.5e-29 132.1 145 46.9
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.9e-27 126.3 139 48.9
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 1.2e-26 123.6 141 47.5
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 3.6e-26 122.1 141 47.5
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 3.0e-25 119.0 143 44.1
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 4.5e-21 105.1 161 40.4
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 4.5e-21 105.1 161 40.4
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 2.3e-20 102.8 152 44.1
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 3.8e-20 102.1 161 39.8
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 2.5e-19 99.4 104 46.2
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.3e-19 99.0 152 42.1
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 7.2e-19 97.8 161 39.1
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 7.5e-16 87.8 130 37.7
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-15 86.3 123 41.5
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 4.9e-15 85.1 84 53.6
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 1.4e-14 83.6 134 37.3
Medtr6g088780 Medicago truncatula HOM05D008859 ORTHO05D007166 1.8e-14 83.2 112 42.0
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.4e-14 82.8 156 35.3
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 3.1e-14 82.4 79 54.4
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.4e-14 81.6 154 37.7
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 9.2e-14 80.9 164 35.4
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 2.0e-13 79.7 97 46.4
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.7e-13 79.3 156 34.0
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-13 78.2 165 33.3
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-13 78.2 142 35.2
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 7.8e-13 77.8 156 34.0
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-12 77.4 161 32.9
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-12 76.6 115 40.0
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-12 76.3 115 40.9
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 3.8e-12 75.5 115 40.0
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 3.8e-12 75.5 158 34.8
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 5.0e-12 75.1 118 38.1
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 5.0e-12 75.1 142 34.5
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 6.6e-12 74.7 105 41.0
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-11 73.9 165 32.7
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-11 73.9 115 40.0
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.5e-11 73.6 96 38.5
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-11 73.2 166 32.5
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-11 72.8 115 40.0
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-11 72.0 115 39.1
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 5.6e-11 71.6 142 34.5
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 5.6e-11 71.6 115 39.1
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 7.3e-11 71.2 153 33.3
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 9.5e-11 70.9 126 37.3
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 9.5e-11 70.9 115 39.1
TPR.G7424 Trifolium pratense HOM05D009811 ORTHO05D007166 2.1e-10 69.7 86 37.2
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-10 69.3 144 35.4
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 3.6e-10 68.9 142 33.8
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 6.1e-10 68.2 116 37.9
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.1e-10 68.2 92 40.2
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 8.0e-10 67.8 115 38.3
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.0e-09 67.4 138 31.9
Glyma.06G231400 Glycine max HOM05D008859 ORTHO05D007166 1.8e-09 66.6 148 33.1
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-09 66.6 92 41.3
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 2.3e-09 66.2 80 43.8
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-09 65.9 115 37.4
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-09 65.9 132 34.1
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-09 65.5 114 36.0
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-09 65.5 89 41.6
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 5.2e-09 65.1 80 42.5
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 5.2e-09 65.1 115 37.4
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.8e-09 64.7 118 34.7
Ca_25708_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 8.9e-09 64.3 153 33.3
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-08 63.9 103 35.9
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-08 63.5 78 42.3
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 1.5e-08 63.5 142 33.1
Ca_07509_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.0e-08 63.2 115 33.0
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 2.0e-08 63.2 115 34.8
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 2.6e-08 62.8 126 33.3
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.6e-08 62.8 116 36.2
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.5e-08 61.2 92 39.1
Psat1g076560 Pisum sativum HOM05D009811 ORTHO05D007166 1.3e-07 60.5 102 36.3
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 2.2e-07 59.7 106 34.9
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 4.9e-07 58.5 73 41.1
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 4.9e-07 58.5 143 30.1
Lalb_Chr02g0153941 Lupinus albus HOM05D008859 ORTHO05D007166 8.3e-07 57.8 50 54.0
Psat1g198560 Pisum sativum HOM05D008859 ORTHO05D007166 1.1e-06 57.4 106 33.0
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-06 56.6 162 26.5
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-06 55.8 165 31.5
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 7.0e-06 54.7 58 44.8
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 9.2e-06 54.3 54 50.0
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 9.2e-06 54.3 105 34.3


User provided reference genes

Program Settings