Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.1e-202 708.8 347 100.0
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 7.8e-197 690.3 343 98.8
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 2.3e-193 678.7 347 95.7
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 8.9e-193 676.8 347 95.7
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 9.9e-192 673.3 347 94.5
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 8.4e-183 643.7 343 91.3
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.4e-182 642.9 344 89.0
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 1.2e-181 639.8 344 89.8
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 1.6e-181 639.4 344 89.5
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 3.5e-181 638.3 344 89.2
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 6.9e-177 624.0 342 86.8
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 1.2e-176 623.2 342 86.5
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 9.9e-176 620.2 342 86.3
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 4.2e-174 614.8 338 86.4
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 3.5e-173 611.7 342 84.8
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 3.0e-172 608.6 342 84.2
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 5.6e-171 604.4 343 84.3
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 5.6e-171 604.4 346 82.4
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 9.6e-171 603.6 346 82.9
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 9.6e-171 603.6 346 82.1
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 2.1e-170 602.4 346 81.8
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 3.6e-170 601.7 346 81.8
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 4.8e-170 601.3 342 83.0
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 8.1e-170 600.5 342 84.2
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 1.4e-169 599.7 342 83.0
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 3.1e-169 598.6 342 83.3
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 5.3e-169 597.8 343 82.2
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.5e-168 596.3 342 82.2
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 2.0e-168 595.9 342 83.0
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 3.4e-168 595.1 343 81.9
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.3e-167 593.2 343 82.5
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.7e-167 592.8 346 80.9
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 2.2e-167 592.4 342 81.6
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 2.2e-167 592.4 342 81.6
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 2.9e-167 592.0 342 81.6
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 4.9e-167 591.3 342 81.9
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 4.9e-167 591.3 341 83.6
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 6.4e-167 590.9 342 81.9
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 8.4e-167 590.5 341 82.7
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 1.1e-166 590.1 346 80.9
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 1.1e-166 590.1 341 82.1
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 2.4e-166 589.0 345 80.0
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 2.4e-166 589.0 344 80.5
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 5.4e-166 587.8 342 81.0
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 5.4e-166 587.8 341 82.7
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 5.4e-166 587.8 344 80.5
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 1.2e-165 586.6 342 81.6
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.2e-165 586.6 342 81.0
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.6e-165 586.3 342 80.7
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 3.5e-165 585.1 342 81.6
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 3.5e-165 585.1 346 80.9
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 3.5e-165 585.1 342 81.9
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 6.0e-165 584.3 345 79.7
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.0e-164 583.6 341 81.5
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.0e-164 583.6 341 81.5
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.8e-164 582.8 341 80.6
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 2.3e-164 582.4 341 81.5
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 3.0e-164 582.0 342 80.1
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 3.9e-164 581.6 345 79.7
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.1e-163 580.1 342 80.4
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.5e-163 579.7 344 79.1
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.5e-163 579.7 345 79.4
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.5e-163 578.9 341 79.2
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.5e-163 578.9 344 79.7
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 3.3e-163 578.6 342 82.2
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 4.3e-163 578.2 344 79.9
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 4.3e-163 578.2 342 80.1
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 5.6e-163 577.8 344 79.7
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 7.4e-163 577.4 345 79.4
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 7.4e-163 577.4 341 80.9
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 9.6e-163 577.0 344 79.4
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 1.6e-162 576.2 354 79.7
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 2.1e-162 575.9 340 81.2
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 4.8e-162 574.7 341 79.8
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 6.2e-162 574.3 341 79.8
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 6.2e-162 574.3 345 78.6
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 8.1e-162 573.9 355 78.0
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.8e-161 572.8 359 77.7
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 4.0e-161 571.6 341 77.7
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.5e-160 569.7 342 80.7
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 2.0e-160 569.3 345 79.1
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 2.6e-160 568.9 341 77.7
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 4.5e-160 568.2 342 78.1
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 7.6e-160 567.4 356 76.4
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 7.6e-160 567.4 307 89.9
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 7.6e-160 567.4 342 77.5
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 4.9e-159 564.7 348 77.0
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 6.4e-159 564.3 342 79.2
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 1.1e-158 563.5 341 78.3
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 2.1e-157 559.3 322 82.6
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 4.6e-157 558.1 341 77.7
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.3e-156 555.8 342 77.8
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 3.0e-156 555.4 350 76.9
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 3.0e-156 555.4 341 77.7
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 8.7e-156 553.9 389 69.7
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.9e-155 552.7 341 77.1
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.6e-154 549.7 358 75.4
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 3.7e-154 548.5 340 76.8
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 1.7e-151 539.7 430 64.9
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 2.1e-149 532.7 353 73.1
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.8e-148 529.6 348 75.0
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 1.9e-147 526.2 341 73.0
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 3.3e-147 525.4 444 61.3
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 4.2e-142 508.4 339 72.0
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 6.7e-140 501.1 341 72.4
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 1.7e-138 496.5 342 71.1
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 1.5e-136 490.0 339 69.9
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 3.6e-133 478.8 341 69.8
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 1.5e-131 473.4 272 82.4
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.6e-125 453.4 327 66.4
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.4e-121 439.5 253 81.8
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.8e-119 432.2 341 64.8
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.5e-118 430.3 253 79.8
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 6.8e-116 421.4 339 61.4
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.5e-112 409.1 313 67.1
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.5e-112 409.1 313 67.1
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.2e-111 406.4 381 57.7
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 2.7e-109 399.4 231 79.7
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 3.6e-109 399.1 228 81.6
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 1.2e-107 394.0 342 55.8
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 6.1e-101 371.7 245 73.1
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.0e-100 369.4 318 61.0
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 4.4e-99 365.5 343 58.0
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 8.3e-98 361.3 342 54.4
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 5.8e-91 338.6 254 67.7
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 7.5e-91 338.2 339 51.9
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.2e-85 320.9 189 81.0
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 7.5e-83 311.6 190 77.4
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 5.2e-76 288.9 170 80.0
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 2.2e-74 283.5 217 67.7
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 5.8e-59 232.3 157 71.3
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 1.1e-54 218.0 134 76.1
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 3.8e-50 203.0 116 81.0
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 3.2e-49 199.9 340 38.2
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 2.1e-48 197.2 117 79.5
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 4.8e-45 186.0 94 93.6
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 2.1e-40 170.6 99 79.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 8.7e-39 165.2 276 40.2
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 7.4e-38 162.2 354 33.3
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-26 125.2 81 82.7
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.0e-22 110.9 95 57.9
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 2.8e-21 107.1 87 65.5
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 1.1e-20 105.1 255 32.5
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 5.9e-19 99.4 169 39.6
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 2.3e-15 87.4 45 88.9
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 9.4e-09 65.5 47 63.8


User provided reference genes

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