Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G106600 Phaseolus vulgaris HOM05D006269 ORTHO05D001487 1.7e-254 882.1 423 100.0
Phvul.010G107400 Phaseolus vulgaris HOM05D006269 ORTHO05D001487 2.9e-230 801.6 415 93.5
VMungo0331G1091 Vigna mungo HOM05D006269 ORTHO05D001487 4.3e-189 664.8 399 79.7
Glyma.16G030000 Glycine max HOM05D006269 ORTHO05D001487 7.8e-183 644.0 409 76.8
Glyma.07G061500 Glycine max HOM05D006269 ORTHO05D001487 4.0e-179 631.7 417 76.3
TPR.G21288 Trifolium pratense HOM05D006269 ORTHO05D001487 6.3e-116 421.8 450 51.3
Lj3g0001651 Lotus japonicus HOM05D006269 ORTHO05D001487 1.1e-112 411.0 433 53.3
Medtr8g028265 Medicago truncatula HOM05D006269 ORTHO05D001487 8.0e-111 404.8 425 50.8
Lalb_Chr10g0096511 Lupinus albus HOM05D006269 ORTHO05D001487 1.9e-104 383.6 435 49.7
arahy.Tifrunner.gnm1.ann1.YSVF0U Arachis hypogaea HOM05D006269 ORTHO05D001487 6.6e-97 358.6 447 47.9
arahy.Tifrunner.gnm1.ann1.II6FYR Arachis hypogaea HOM05D006269 ORTHO05D001487 3.6e-95 352.8 449 47.7
Ca_23548_v3 Cicer arietinum L. HOM05D006269 ORTHO05D001487 6.1e-95 352.1 420 49.8
Psat4g157480 Pisum sativum HOM05D006269 ORTHO05D001487 5.2e-94 349.0 428 48.8
Cfa003851 Carpinus fangiana HOM05D006269 ORTHO05D001487 5.8e-85 318.9 446 42.2
Haze_15599 Corylus avellana HOM05D006269 ORTHO05D001487 2.2e-84 317.0 444 41.7
COL.COLO4_06360 Corchorus olitorius HOM05D006269 ORTHO05D001487 1.9e-72 277.3 431 40.1
Thecc.01G349600 Theobroma cacao HOM05D006269 ORTHO05D001487 2.8e-71 273.5 428 39.3
vmacro13212 Vaccinium macrocarpon HOM05D006269 ORTHO05D001487 6.2e-71 272.3 435 38.9
Sc01g0003100 Simmondsia chinensis HOM05D006269 ORTHO05D001487 3.7e-68 263.1 432 38.0
Potri.002G166300 Populus trichocarpa HOM05D006269 ORTHO05D001487 4.6e-66 256.1 448 37.1
QL04p034904 Quercus lobata HOM05D006269 ORTHO05D001487 3.9e-65 253.1 431 37.6
Gohir.D08G148200 Gossypium hirsutum HOM05D006269 ORTHO05D001487 8.6e-65 251.9 431 36.0
Gorai.004G153900 Gossypium raimondii HOM05D006269 ORTHO05D001487 2.8e-63 246.9 431 36.0
Gohir.A08G126800 Gossypium hirsutum HOM05D006269 ORTHO05D001487 6.2e-63 245.7 426 36.2
Cpa.g.sc184.9 Carica papaya HOM05D006269 ORTHO05D001487 1.4e-62 244.6 430 37.2
Rhsim10G0141000 Rhododendron simsii HOM05D006269 ORTHO05D001487 5.2e-62 242.7 437 37.5
Sabra02G0145300 Salix brachista HOM05D006269 ORTHO05D001487 3.4e-61 240.0 447 35.3
CAN.G78.145 Capsicum annuum HOM05D006269 ORTHO05D001487 1.3e-60 238.0 426 37.8
Peaxi162Scf01254g00022 Petunia axillaris HOM05D006269 ORTHO05D001487 2.2e-60 237.3 424 37.7
Actinidia20177 Actinidia chinensis HOM05D006269 ORTHO05D001487 6.0e-58 229.2 433 36.3
PGSC0003DMG400000079 Solanum tuberosum HOM05D006269 ORTHO05D001487 1.3e-57 228.0 419 36.8
Manes.01G250800 Manihot esculenta HOM05D006269 ORTHO05D001487 2.3e-57 227.3 434 35.0
Prupe.2G181700 Prunus persica HOM05D006269 ORTHO05D001487 2.3e-57 227.3 463 35.9
Nitab4.5_0013021g0030 Nicotiana tabacum HOM05D006269 ORTHO05D001487 5.1e-57 226.1 424 35.6
Oeu008674.2 Olea europaea HOM05D006269 ORTHO05D001487 9.6e-56 221.9 419 35.6
RcHm_v2.0_Chr1g0358421 Rosa chinensis HOM05D006269 ORTHO05D001487 9.6e-56 221.9 471 35.0
FAN06G2203 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.8e-54 217.6 474 35.2
Nitab4.5_0000305g0340 Nicotiana tabacum HOM05D006269 ORTHO05D001487 3.1e-54 216.9 419 35.3
FAN06G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 4.0e-54 216.5 474 35.4
TAR374G0506 Trochodendron aralioides HOM05D006269 ORTHO05D001487 5.3e-54 216.1 433 34.6
FvH4_7g15690 Fragaria vesca HOM05D006269 ORTHO05D001487 2.6e-53 213.8 474 35.2
ClCG06G003310 Citrullus lanatus HOM05D006269 ORTHO05D001487 4.4e-53 213.0 432 36.8
Ciclev10018596m.g Citrus clementina HOM05D006269 ORTHO05D001487 5.8e-53 212.6 420 35.7
Sed0002830 Sechium edule HOM05D006269 ORTHO05D001487 6.4e-52 209.1 431 35.0
Hund27233 Selenicereus undatus HOM05D006269 ORTHO05D001487 9.3e-51 205.3 444 34.2
FAN10G2074 Fragaria x ananassa HOM05D006269 ORTHO05D001487 7.8e-50 202.2 463 35.2
Ah.05g180020 Amaranthus hybridus HOM05D006269 ORTHO05D001487 1.7e-49 201.1 446 33.6
FAN10G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 3.9e-49 199.9 463 35.0
AUR62004430 Chenopodium quinoa HOM05D006269 ORTHO05D001487 5.1e-49 199.5 499 32.9
MELO3C021171.2 Cucumis melo HOM05D006269 ORTHO05D001487 1.1e-48 198.4 431 34.8
Cc02_g38780 Coffea canephora HOM05D006269 ORTHO05D001487 1.5e-48 198.0 436 33.3
CsaV3_6G000970 Cucumis sativus L. HOM05D006269 ORTHO05D001487 3.3e-48 196.8 431 35.3
Solyc01g095320.4 Solanum lycopersicum HOM05D006269 ORTHO05D001487 4.8e-47 193.0 421 33.5
FAN03G1935 Fragaria x ananassa HOM05D006269 ORTHO05D001487 8.1e-47 192.2 445 34.4
EL10Ac1g00334 Beta vulgaris HOM05D006269 ORTHO05D001487 1.1e-46 191.8 457 33.9
MBI06_g04303_MAGBIO Magnolia biondii HOM05D006269 ORTHO05D001487 1.1e-46 191.8 422 34.8
AUR62022637 Chenopodium quinoa HOM05D006269 ORTHO05D001487 3.1e-46 190.3 502 31.9
Migut.N01576 Erythranthe guttata HOM05D006269 ORTHO05D001487 4.9e-44 183.0 418 33.3
Aqoxy1G02938 Aquilegia oxysepala HOM05D006269 ORTHO05D001487 8.4e-44 182.2 439 35.5
SalBow5G2113 Salvia bowleyana HOM05D006269 ORTHO05D001487 2.4e-43 180.6 428 32.9
PGR031G2857 Punica granatum HOM05D006269 ORTHO05D001487 1.1e-40 171.8 429 32.6
CANSAT56G0891 Cannabis sativa HOM05D006269 ORTHO05D001487 9.6e-40 168.7 445 30.8
MD01G1073600 Malus domestica HOM05D006269 ORTHO05D001487 3.7e-39 166.8 462 31.8
Eucgr.D02334 Eucalyptus grandis HOM05D006269 ORTHO05D001487 8.1e-39 165.6 435 33.3
Sopen01g039110 Solanum pennellii HOM05D006269 ORTHO05D001487 4.2e-35 153.3 414 30.4
SGA_v2.0_scaffold11G05704 Striga asiatica HOM05D006269 ORTHO05D001487 4.9e-28 129.8 427 31.1
AL4G45510 Arabidopsis lyrata HOM05D006269 ORTHO05D001487 2.5e-27 127.5 513 27.1
Thhalv10001302m.g Eutrema salsugineum HOM05D006269 ORTHO05D001487 6.1e-26 122.9 428 27.6
DCAR_008644 Daucus carota HOM05D001461 ORTHO05D001487 2.3e-25 120.9 443 27.3
AT2G46240 Arabidopsis thaliana HOM05D006269 ORTHO05D001487 1.5e-24 118.2 496 24.4
Aa31LG1G27630 Aethionema arabicum HOM05D006269 ORTHO05D001487 7.4e-24 115.9 411 29.4
Lsat_1_v5_gn_3_138421 Lactuca sativa HOM05D006269 ORTHO05D001487 3.1e-22 110.5 435 27.4
GSVIVG01027028001 Vitis vinifera HOM05D006269 ORTHO05D001487 4.1e-22 110.2 218 37.2
Zm00001eb237960 Zea mays HOM05D006269 ORTHO05D001487 7.7e-21 105.9 457 30.2
BcaC02g12701 Brassica carinata HOM05D006269 ORTHO05D001487 2.9e-20 104.0 372 27.4
A05p01560 Brassica napus HOM05D006269 ORTHO05D001487 3.8e-20 103.6 408 28.2
C04p01780 Brassica napus HOM05D006269 ORTHO05D001487 8.5e-20 102.4 440 28.2
BcaC02g12510 Brassica carinata HOM05D006269 ORTHO05D001487 6.1e-18 96.3 436 26.6
Carub.0004s2894 Capsella rubella HOM05D006269 ORTHO05D001487 2.3e-17 94.4 522 25.9
BraA05t19151Z Brassica rapa HOM05D006269 ORTHO05D001487 2.0e-16 91.3 432 27.1
Sp4g28290 Schrenkiella parvula HOM05D006269 ORTHO05D001487 2.0e-16 91.3 411 27.7
HPP92_008793 Vanilla planifolia HOM05D006269 ORTHO05D001487 2.0e-16 91.3 455 25.7
Os02g0259850 Oryza sativa ssp. japonica HOM05D006269 ORTHO05D001487 1.3e-15 88.6 280 27.5
ATR1093G003 Amborella trichopoda HOM05D006269 ORTHO05D001487 1.4e-09 68.6 461 24.7


User provided reference genes

Program Settings