Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G106500 Phaseolus vulgaris HOM05D006269 ORTHO05D001487 3.5e-110 401.7 217 100.0
Phvul.010G107400 Phaseolus vulgaris HOM05D006269 ORTHO05D001487 5.2e-66 255.0 251 65.7
VMungo0331G1091 Vigna mungo HOM05D006269 ORTHO05D001487 1.0e-32 144.4 227 48.9
Glyma.16G030000 Glycine max HOM05D006269 ORTHO05D001487 9.3e-31 137.9 274 43.8
Glyma.07G061500 Glycine max HOM05D006269 ORTHO05D001487 4.6e-30 135.6 257 43.6
Lalb_Chr10g0096511 Lupinus albus HOM05D006269 ORTHO05D001487 7.7e-17 91.7 248 37.9
Medtr8g028265 Medicago truncatula HOM05D006269 ORTHO05D001487 1.9e-15 87.0 198 40.4
Lj3g0001651 Lotus japonicus HOM05D006269 ORTHO05D001487 2.5e-15 86.7 215 36.7
Ca_23548_v3 Cicer arietinum L. HOM05D006269 ORTHO05D001487 3.6e-14 82.8 182 38.5
FAN10G2074 Fragaria x ananassa HOM05D006269 ORTHO05D001487 2.6e-12 76.6 94 50.0
FAN03G1935 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.3e-11 74.3 96 50.0
Psat4g157480 Pisum sativum HOM05D006269 ORTHO05D001487 2.2e-11 73.6 229 36.2
arahy.Tifrunner.gnm1.ann1.YSVF0U Arachis hypogaea HOM05D006269 ORTHO05D001487 2.8e-11 73.2 237 37.1
Prupe.2G181700 Prunus persica HOM05D006269 ORTHO05D001487 2.8e-11 73.2 75 60.0
TPR.G21288 Trifolium pratense HOM05D006269 ORTHO05D001487 2.8e-11 73.2 190 39.5
RcHm_v2.0_Chr1g0358421 Rosa chinensis HOM05D006269 ORTHO05D001487 4.8e-11 72.4 90 47.8
CAN.G78.145 Capsicum annuum HOM05D006269 ORTHO05D001487 6.3e-11 72.0 78 55.1
FvH4_7g15690 Fragaria vesca HOM05D006269 ORTHO05D001487 1.1e-10 71.2 96 49.0
FAN06G2203 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.1e-10 71.2 96 49.0
Potri.002G166300 Populus trichocarpa HOM05D006269 ORTHO05D001487 1.1e-10 71.2 219 34.7
FAN06G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.4e-10 70.9 116 44.0
PGSC0003DMG400000079 Solanum tuberosum HOM05D006269 ORTHO05D001487 1.8e-10 70.5 78 52.6
Sopen01g039110 Solanum pennellii HOM05D006269 ORTHO05D001487 3.1e-10 69.7 81 49.4
Peaxi162Scf01254g00022 Petunia axillaris HOM05D006269 ORTHO05D001487 5.3e-10 68.9 103 47.6
MD01G1073600 Malus domestica HOM05D006269 ORTHO05D001487 6.9e-10 68.6 111 41.4
QL04p034904 Quercus lobata HOM05D006269 ORTHO05D001487 6.9e-10 68.6 97 46.4
Haze_15599 Corylus avellana HOM05D006269 ORTHO05D001487 1.5e-09 67.4 119 40.3
COL.COLO4_06360 Corchorus olitorius HOM05D006269 ORTHO05D001487 3.4e-09 66.2 211 32.7
Cfa003851 Carpinus fangiana HOM05D006269 ORTHO05D001487 5.9e-09 65.5 120 40.0
FAN10G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 7.7e-09 65.1 211 30.8
PGR031G2857 Punica granatum HOM05D006269 ORTHO05D001487 1.7e-08 63.9 90 46.7
Cc02_g38780 Coffea canephora HOM05D006269 ORTHO05D001487 5.0e-08 62.4 70 50.0
ClCG06G003310 Citrullus lanatus HOM05D006269 ORTHO05D001487 8.5e-08 61.6 62 56.5
SGA_v2.0_scaffold11G05704 Striga asiatica HOM05D006269 ORTHO05D001487 1.4e-07 60.8 76 44.7
Glyma.01G121200 Glycine max HOM05D006269 ORTHO05D001487 2.5e-07 60.1 59 62.7
vmacro13212 Vaccinium macrocarpon HOM05D006269 ORTHO05D001487 2.5e-07 60.1 226 33.6
Duzib133G1471 Durio zibethinus HOM05D006269 ORTHO05D001487 3.2e-07 59.7 62 53.2
Glyma.03G060902 Glycine max HOM05D006269 ORTHO05D001487 3.2e-07 59.7 55 65.5
Nitab4.5_0013021g0030 Nicotiana tabacum HOM05D006269 ORTHO05D001487 3.2e-07 59.7 203 30.5
Aa31LG1G27630 Aethionema arabicum HOM05D006269 ORTHO05D001487 4.2e-07 59.3 72 54.2
AUR62004430 Chenopodium quinoa HOM05D006269 ORTHO05D001487 5.5e-07 58.9 112 38.4
HanXRQChr06g0166911 Helianthus annuus HOM05D006269 ORTHO05D001487 7.2e-07 58.5 111 40.5
Sabra02G0145300 Salix brachista HOM05D006269 ORTHO05D001487 7.2e-07 58.5 108 39.8
Sed0002830 Sechium edule HOM05D006269 ORTHO05D001487 9.4e-07 58.2 89 43.8
AUR62022637 Chenopodium quinoa HOM05D006269 ORTHO05D001487 1.6e-06 57.4 112 39.3
MELO3C021171.2 Cucumis melo HOM05D006269 ORTHO05D001487 2.7e-06 56.6 92 42.4
Lsat_1_v5_gn_3_138421 Lactuca sativa HOM05D006269 ORTHO05D001487 2.7e-06 56.6 61 49.2
Manes.01G250800 Manihot esculenta HOM05D006269 ORTHO05D001487 4.7e-06 55.8 210 31.0
Glyma.18G186200 Glycine max HOM05D006269 ORTHO05D001487 6.1e-06 55.5 71 57.7
Nitab4.5_0000305g0330 Nicotiana tabacum HOM05D006269 ORTHO05D001487 6.1e-06 55.5 203 29.6
Rhsim10G0141000 Rhododendron simsii HOM05D006269 ORTHO05D001487 6.1e-06 55.5 195 32.3


User provided reference genes

Program Settings