Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 4.0e-99 364.8 184 100.0
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.4e-88 328.9 182 92.9
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 8.6e-86 320.5 180 91.1
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 8.6e-86 320.5 180 91.1
VMungo1114G0001 Vigna mungo HOM05D008683 ORTHO05D010884 4.4e-82 308.1 179 85.5
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 2.3e-54 216.1 161 67.1
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 6.6e-54 214.5 176 65.9
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 8.7e-54 214.2 161 66.5
VMungo0331G0622 Vigna mungo HOM05D008683 ORTHO05D010884 7.1e-48 194.5 161 63.4
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 2.1e-47 193.0 127 72.4
VMungo0331G0348 Vigna mungo HOM05D008683 ORTHO05D010884 3.5e-47 192.2 174 60.3
Phvul.010G106200 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 4.9e-41 171.8 163 55.8
Phvul.010G107300 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 8.4e-41 171.0 163 55.2
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 1.1e-40 170.6 180 52.8
Phvul.010G107000 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 3.5e-39 165.6 153 55.6
Phvul.010G107100 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 6.0e-39 164.9 163 54.0
Phvul.010G106000 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.9e-37 159.8 162 53.1
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 2.5e-37 159.5 177 50.8
Phvul.010G106900 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.1e-35 154.1 168 53.6
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 3.8e-33 145.6 172 50.0
Medtr8g028315 Medicago truncatula HOM05D008683 ORTHO05D010884 5.0e-33 145.2 177 47.5
Phvul.010G106700 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 5.0e-33 145.2 142 53.5
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.1e-32 144.1 170 46.5
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 4.2e-32 142.1 151 53.0
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 7.2e-32 141.4 142 53.5
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 9.3e-32 141.0 178 44.4
Phvul.010G106100 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.3e-30 137.1 125 56.8
Phvul.010G106400 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 6.7e-30 134.8 168 47.0
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 6.7e-30 134.8 175 43.4
Phvul.010G106300 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.1e-29 134.0 123 55.3
Psat0s780g0080 Pisum sativum HOM05D008683 ORTHO05D010884 1.1e-29 134.0 179 42.5
Medtr8g028275 Medicago truncatula HOM05D008683 ORTHO05D010884 3.3e-29 132.5 176 47.2
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 7.4e-29 131.3 106 58.5
TPR.G18157 Trifolium pratense HOM05D008683 ORTHO05D010884 2.2e-28 129.8 169 46.7
TPR.G22846 Trifolium pratense HOM05D008683 ORTHO05D010884 2.4e-27 126.3 183 40.4
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 7.7e-26 121.3 143 45.5
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 5.5e-24 115.2 130 47.7
TPR.G18169 Trifolium pratense HOM05D008683 ORTHO05D010884 2.1e-23 113.2 173 43.4
Phvul.010G106800 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 3.6e-23 112.5 88 64.8
Medtr8g028335 Medicago truncatula HOM05D008683 ORTHO05D010884 5.1e-22 108.6 132 50.8
TPR.G31852 Trifolium pratense HOM05D008683 ORTHO05D010884 2.8e-20 102.8 124 46.8
Medtr8g028280 Medicago truncatula HOM05D008683 ORTHO05D010884 2.6e-18 96.3 157 39.5
TPR.G29388 Trifolium pratense HOM05D008683 ORTHO05D010884 1.6e-15 87.0 110 45.5
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 3.7e-12 75.9 125 36.0
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.3e-09 67.4 131 35.9
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.9e-09 66.2 129 38.0
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 6.5e-09 65.1 123 32.5
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 8.5e-09 64.7 120 35.0
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.9e-08 63.5 117 35.9
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 2.5e-08 63.2 110 37.3
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 2.5e-08 63.2 120 35.0
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.5e-08 63.2 96 38.5
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.2e-08 62.8 178 32.0
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 4.2e-08 62.4 127 31.5
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 5.5e-08 62.0 161 31.1
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 5.5e-08 62.0 105 40.0
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.2e-08 61.6 121 33.1
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 1.2e-07 60.8 141 34.8
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 1.6e-07 60.5 155 28.4
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.6e-07 60.5 117 34.2
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.7e-07 59.7 131 33.6
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.1e-07 58.5 176 31.2
Medtr2g035940 Medicago truncatula HOM05D008683 ORTHO05D010884 8.0e-07 58.2 42 59.5
FAN06G1149 Fragaria x ananassa HOM05D027471 ORTHO05D012876 1.0e-06 57.8 163 29.4
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 1.0e-06 57.8 141 35.5
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 1.4e-06 57.4 106 37.7
FAN03G2804 Fragaria x ananassa HOM05D012558 ORTHO05D012876 1.8e-06 57.0 137 35.0
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.8e-06 57.0 111 32.4
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 2.3e-06 56.6 122 33.6
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 3.0e-06 56.2 114 30.7
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.0e-06 56.2 143 29.4
FvH4_7g11471 Fragaria vesca HOM05D012558 ORTHO05D012876 4.0e-06 55.8 154 27.9
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 4.0e-06 55.8 121 35.5
FAN06G4300 Fragaria x ananassa HOM05D012558 ORTHO05D012876 4.0e-06 55.8 154 27.9
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 4.0e-06 55.8 99 36.4
FAN06G2646 Fragaria x ananassa HOM05D006804 ORTHO05D012876 5.2e-06 55.5 158 32.9
FAN06G2981 Fragaria x ananassa HOM05D006804 ORTHO05D012876 5.2e-06 55.5 158 32.9
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 6.7e-06 55.1 89 37.1


User provided reference genes

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