Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.5e-101 372.9 192 100.0
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.5e-101 372.9 192 100.0
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.2e-90 336.7 194 90.7
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.6e-85 317.4 180 91.1
VMungo1114G0001 Vigna mungo HOM05D008683 ORTHO05D010884 9.6e-80 300.4 180 83.9
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 6.3e-55 218.0 169 67.5
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 2.4e-54 216.1 169 66.9
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 5.0e-52 208.4 174 65.5
VMungo0331G0622 Vigna mungo HOM05D008683 ORTHO05D010884 4.7e-50 201.8 162 66.0
VMungo0331G0348 Vigna mungo HOM05D008683 ORTHO05D010884 7.9e-50 201.1 179 62.6
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 6.7e-49 198.0 127 74.0
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 2.0e-40 169.9 179 55.3
Phvul.010G106200 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.4e-40 167.9 165 57.0
Phvul.010G107300 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.3e-39 167.2 165 56.4
Phvul.010G107000 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 6.3e-39 164.9 165 55.8
Phvul.010G107100 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 8.2e-39 164.5 164 56.1
Phvul.010G106000 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.9e-36 156.0 168 53.0
Phvul.010G106900 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 3.8e-36 155.6 169 55.0
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 4.2e-35 152.1 178 50.6
Phvul.010G106700 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 9.4e-35 151.0 142 55.6
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 1.6e-34 150.2 173 52.0
Phvul.010G106100 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.8e-33 146.7 136 59.6
Medtr8g028315 Medicago truncatula HOM05D008683 ORTHO05D010884 3.3e-32 142.5 176 46.6
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 3.3e-32 142.5 142 54.9
Phvul.010G106300 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.7e-31 140.2 122 59.0
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 3.1e-30 136.0 135 57.8
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 4.1e-30 135.6 171 46.2
Psat0s780g0080 Pisum sativum HOM05D008683 ORTHO05D010884 7.0e-30 134.8 166 44.0
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 9.1e-30 134.4 165 45.5
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 2.7e-29 132.9 104 60.6
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 1.0e-28 131.0 168 44.0
Medtr8g028275 Medicago truncatula HOM05D008683 ORTHO05D010884 2.2e-28 129.8 174 48.3
Phvul.010G106400 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 5.0e-28 128.6 169 47.9
TPR.G18157 Trifolium pratense HOM05D008683 ORTHO05D010884 6.5e-28 128.3 170 47.6
TPR.G22846 Trifolium pratense HOM05D008683 ORTHO05D010884 1.5e-27 127.1 137 50.4
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 3.6e-26 122.5 143 44.8
TPR.G18169 Trifolium pratense HOM05D008683 ORTHO05D010884 2.0e-24 116.7 174 46.0
Phvul.010G106800 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 3.4e-24 115.9 88 67.0
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 4.8e-23 112.1 127 46.5
Medtr8g028335 Medicago truncatula HOM05D008683 ORTHO05D010884 4.1e-22 109.0 146 51.4
TPR.G31852 Trifolium pratense HOM05D008683 ORTHO05D010884 1.0e-20 104.4 119 47.9
Medtr8g028280 Medicago truncatula HOM05D008683 ORTHO05D010884 3.6e-18 95.9 163 41.7
TPR.G29388 Trifolium pratense HOM05D008683 ORTHO05D010884 7.0e-14 81.6 111 45.9
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 1.9e-11 73.6 128 38.3
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-09 67.8 169 32.5
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 4.0e-09 65.9 123 32.5
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-08 63.9 167 32.3
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 2.6e-08 63.2 120 34.2
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.4e-08 62.8 166 30.1
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 4.4e-08 62.4 127 31.5
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.4e-08 62.4 157 30.6
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 5.8e-08 62.0 166 29.5
Medtr2g035940 Medicago truncatula HOM05D008683 ORTHO05D010884 5.8e-08 62.0 40 67.5
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 7.5e-08 61.6 141 34.0
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.8e-08 61.2 158 33.5
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 1.3e-07 60.8 110 36.4
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 2.2e-07 60.1 146 32.2
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 2.2e-07 60.1 121 33.9
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.7e-07 59.3 120 34.2
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.7e-07 59.3 117 34.2
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 6.4e-07 58.5 126 34.9
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.4e-07 58.5 95 41.1
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 2.4e-06 56.6 142 34.5
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.2e-06 56.2 117 32.5
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.1e-06 55.8 107 33.6
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.1e-06 55.8 120 34.2
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 5.4e-06 55.5 89 38.2
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 5.4e-06 55.5 116 31.9


User provided reference genes

Program Settings