Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G101700 Phaseolus vulgaris HOM05D001478 ORTHO05D002240 1.6e-50 202.6 113 100.0
Glyma.18G050100 Glycine max HOM05D001478 ORTHO05D002240 2.5e-35 152.1 98 80.6
Glyma.11G200700 Glycine max HOM05D001478 ORTHO05D002240 1.7e-31 139.4 98 75.5
Phvul.006G081100 Phaseolus vulgaris HOM05D001478 ORTHO05D002240 4.1e-30 134.8 68 97.1
VMungo0540G1620 Vigna mungo HOM05D001478 ORTHO05D002240 2.9e-28 128.6 68 92.6
TPR.G13818 Trifolium pratense HOM05D001478 ORTHO05D002240 8.0e-26 120.6 113 61.1
Medtr3g062850 Medicago truncatula HOM05D001478 ORTHO05D002240 5.2e-25 117.9 113 62.8
Psat5g145760 Pisum sativum HOM05D001478 ORTHO05D002240 1.2e-24 116.7 109 59.6
Lj6g0003087 Lotus japonicus HOM05D001478 ORTHO05D002240 2.0e-24 115.9 98 65.3
Lalb_Chr18g0054051 Lupinus albus HOM05D001478 ORTHO05D002240 1.7e-23 112.8 109 59.6
Lalb_Chr15g0085631 Lupinus albus HOM05D001478 ORTHO05D002240 1.1e-22 110.2 98 63.3
Lalb_Chr20g0117251 Lupinus albus HOM05D001478 ORTHO05D002240 1.1e-19 100.1 109 55.0
Ca_15085_v3 Cicer arietinum L. HOM05D001478 ORTHO05D002240 1.4e-17 93.2 60 75.0
CiPaw.14G048800 Carya illinoinensis HOM05D001478 ORTHO05D002240 3.1e-17 92.0 98 52.0
GSVIVG01024531001 Vitis vinifera HOM05D001478 ORTHO05D002240 5.2e-17 91.3 108 51.9
CSS0010609 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 2.6e-16 89.0 112 48.2
Cpa.g.sc2.265 Carica papaya HOM05D001478 ORTHO05D002240 4.9e-15 84.7 91 53.8
ClCG02G018960 Citrullus lanatus HOM05D001478 ORTHO05D002240 4.9e-15 84.7 103 52.4
Dinv28757 Davidia involucrata HOM05D001478 ORTHO05D002240 8.3e-15 84.0 96 51.0
CsaV3_6G013230 Cucumis sativus L. HOM05D001478 ORTHO05D002240 1.1e-14 83.6 103 52.4
Rhsim01G0244600 Rhododendron simsii HOM05D001478 ORTHO05D002240 4.1e-14 81.6 98 50.0
Dinv12293 Davidia involucrata HOM05D001478 ORTHO05D002240 5.4e-14 81.3 91 52.7
Sed0002986 Sechium edule HOM05D001478 ORTHO05D002240 7.0e-14 80.9 96 51.0
Cc01_g15500 Coffea canephora HOM05D001478 ORTHO05D002240 9.2e-14 80.5 112 45.5
TAR633G0327 Trochodendron aralioides HOM05D001478 ORTHO05D002240 9.2e-14 80.5 54 72.2
MELO3C019592.2 Cucumis melo HOM05D001478 ORTHO05D002240 2.0e-13 79.3 121 47.1
Thecc.09G365700 Theobroma cacao HOM05D001478 ORTHO05D002240 3.5e-13 78.6 91 47.3
Aqoxy4G03312 Aquilegia oxysepala HOM05D001478 ORTHO05D002240 4.6e-13 78.2 85 55.3
Duzib168G0243 Durio zibethinus HOM05D001478 ORTHO05D002240 4.6e-13 78.2 94 50.0
QL01p023736 Quercus lobata HOM05D001478 ORTHO05D002240 4.6e-13 78.2 89 52.8
CSS0044389 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 6.0e-13 77.8 98 48.0
CSS0048809 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 6.0e-13 77.8 98 48.0
COL.COLO4_11228 Corchorus olitorius HOM05D001478 ORTHO05D002240 6.0e-13 77.8 91 47.3
Manes.18G124700 Manihot esculenta HOM05D001478 ORTHO05D002240 6.0e-13 77.8 122 43.4
HPP92_000778 Vanilla planifolia HOM05D001478 ORTHO05D002240 1.7e-12 76.3 81 53.1
MBI15_g31030_MAGBIO Magnolia biondii HOM05D001478 ORTHO05D002240 2.3e-12 75.9 98 46.9
Sed0018445 Sechium edule HOM05D001478 ORTHO05D002240 3.0e-12 75.5 108 46.3
Actinidia23150 Actinidia chinensis HOM05D001478 ORTHO05D002240 3.9e-12 75.1 94 48.9
CiPaw.13G060300 Carya illinoinensis HOM05D001478 ORTHO05D002240 3.9e-12 75.1 62 58.1
HPP92_026803 Vanilla planifolia HOM05D001478 ORTHO05D002240 3.9e-12 75.1 81 51.9
Atru.chr10.2352 Acer truncatum HOM05D001478 ORTHO05D002240 8.6e-12 73.9 79 54.4
Nn5g26785 Nelumbo nucifera HOM05D001478 ORTHO05D002240 8.6e-12 73.9 98 46.9
Haze_24491 Corylus avellana HOM05D001478 ORTHO05D002240 1.1e-11 73.6 60 55.0
FvH4_3g41090 Fragaria vesca HOM05D001478 ORTHO05D002240 1.1e-11 73.6 116 42.2
FAN16G0166 Fragaria x ananassa HOM05D001478 ORTHO05D002240 1.1e-11 73.6 116 42.2
RcHm_v2.0_Chr5g0073821 Rosa chinensis HOM05D001478 ORTHO05D002240 1.1e-11 73.6 112 45.5
CANSAT54G1469 Cannabis sativa HOM05D001478 ORTHO05D002240 1.5e-11 73.2 111 43.2
FAN11G3068 Fragaria x ananassa HOM05D001478 ORTHO05D002240 1.5e-11 73.2 116 42.2
vmacro14654 Vaccinium macrocarpon HOM05D001478 ORTHO05D002240 1.9e-11 72.8 98 46.9
Lsat_1_v5_gn_8_98961 Lactuca sativa HOM05D001478 ORTHO05D002240 2.5e-11 72.4 100 46.0
TAR623G0687 Trochodendron aralioides HOM05D001478 ORTHO05D002240 2.5e-11 72.4 54 66.7
Ciclev10001288m.g Citrus clementina HOM05D001478 ORTHO05D002240 5.6e-11 71.2 106 42.5
Prupe.6G038600 Prunus persica HOM05D001478 ORTHO05D002240 5.6e-11 71.2 106 43.4
Cfa011857 Carpinus fangiana HOM05D001478 ORTHO05D002240 7.3e-11 70.9 60 53.3
Dinv16936 Davidia involucrata HOM05D001478 ORTHO05D002240 9.5e-11 70.5 94 47.9
ATR1127G080 Amborella trichopoda HOM05D001478 ORTHO05D002240 1.2e-10 70.1 46 69.6
Dinv25370 Davidia involucrata HOM05D001478 ORTHO05D002240 1.2e-10 70.1 111 44.1
GSVIVG01029860001 Vitis vinifera HOM05D001478 ORTHO05D002240 1.6e-10 69.7 96 49.0
Actinidia11637 Actinidia chinensis HOM05D001478 ORTHO05D002240 2.8e-10 68.9 98 45.9
FAN21G1420 Fragaria x ananassa HOM05D001478 ORTHO05D002240 2.8e-10 68.9 81 49.4
FAN25G1206 Fragaria x ananassa HOM05D001478 ORTHO05D002240 6.2e-10 67.8 113 40.7
Gohir.D13G240600 Gossypium hirsutum HOM05D001478 ORTHO05D002240 6.2e-10 67.8 77 54.5
Lsat_1_v5_gn_9_15381 Lactuca sativa HOM05D001478 ORTHO05D002240 8.1e-10 67.4 83 49.4
Gohir.A13G234900 Gossypium hirsutum HOM05D001478 ORTHO05D002240 1.1e-09 67.0 77 51.9
Nitab4.5_0004009g0030 Nicotiana tabacum HOM05D001478 ORTHO05D002240 1.4e-09 66.6 81 49.4
Oeu011400.1 Olea europaea HOM05D001478 ORTHO05D002240 1.8e-09 66.2 51 62.7
Sc21g0004820 Simmondsia chinensis HOM05D001478 ORTHO05D002240 3.1e-09 65.5 79 48.1
Gorai.013G271400 Gossypium raimondii HOM05D001478 ORTHO05D002240 4.0e-09 65.1 104 43.3
Nitab4.5_0003559g0040 Nicotiana tabacum HOM05D001478 ORTHO05D002240 4.0e-09 65.1 40 75.0
BcaB01g04096 Brassica carinata HOM05D001478 ORTHO05D002240 5.2e-09 64.7 78 47.4
Sopen09g018440 Solanum pennellii HOM05D001478 ORTHO05D002240 5.2e-09 64.7 41 73.2
BolC3t14394H Brassica oleracea HOM05D001478 ORTHO05D002240 6.8e-09 64.3 74 48.6
Nitab4.5_0000195g0090 Nicotiana tabacum HOM05D001478 ORTHO05D002240 6.8e-09 64.3 70 51.4
BcaC01g06007 Brassica carinata HOM05D001478 ORTHO05D002240 8.9e-09 63.9 74 48.6
C03p20200 Brassica napus HOM05D001478 ORTHO05D002240 8.9e-09 63.9 74 48.6
HanXRQChr08g0231171 Helianthus annuus HOM05D001478 ORTHO05D002240 8.9e-09 63.9 101 43.6
Sp4g13080 Schrenkiella parvula HOM05D001478 ORTHO05D002240 8.9e-09 63.9 79 44.3
CAN.G369.6 Capsicum annuum HOM05D001478 ORTHO05D002240 1.2e-08 63.5 62 54.8
Actinidia29008 Actinidia chinensis HOM05D001478 ORTHO05D002240 1.5e-08 63.2 107 42.1
BraA03t10986Z Brassica rapa HOM05D001478 ORTHO05D002240 3.4e-08 62.0 92 40.2
Rhsim05G0233800 Rhododendron simsii HOM05D001478 ORTHO05D002240 3.4e-08 62.0 89 46.1
BcaB01g04091 Brassica carinata HOM05D001478 ORTHO05D002240 4.4e-08 61.6 65 55.4
Oeu023894.1 Olea europaea HOM05D001478 ORTHO05D002240 4.4e-08 61.6 50 58.0
Peaxi162Scf00455g00139 Petunia axillaris HOM05D001478 ORTHO05D002240 4.4e-08 61.6 72 50.0
TWI79G0786 Tripterygium wilfordii HOM05D001478 ORTHO05D002240 4.4e-08 61.6 80 46.2
Actinidia11479 Actinidia chinensis HOM05D001478 ORTHO05D002240 5.8e-08 61.2 86 46.5
Os05g0315200 Oryza sativa ssp. japonica HOM05D001478 ORTHO05D002240 5.8e-08 61.2 49 59.2
THA.LOC104826259 Tarenaya hassleriana HOM05D001478 ORTHO05D002240 5.8e-08 61.2 95 38.9
MSTRG.21269 Avicennia marina HOM05D001478 ORTHO05D002240 7.5e-08 60.8 85 48.2
Carub.0004s1169 Capsella rubella HOM05D001478 ORTHO05D002240 9.9e-08 60.5 79 45.6
Aa31LG5G6240 Aethionema arabicum HOM05D001478 ORTHO05D002240 1.3e-07 60.1 89 42.7
AT2G30530 Arabidopsis thaliana HOM05D001478 ORTHO05D002240 1.3e-07 60.1 97 36.1
Zm00001eb350740 Zea mays HOM05D001478 ORTHO05D002240 2.2e-07 59.3 63 50.8
AL4G25410 Arabidopsis lyrata HOM05D001478 ORTHO05D002240 3.7e-07 58.5 78 41.0
Cc06_g00170 Coffea canephora HOM05D001478 ORTHO05D002240 3.7e-07 58.5 80 46.2
Migut.L02049 Erythranthe guttata HOM05D001478 ORTHO05D002240 3.7e-07 58.5 45 62.2
MD11G1050100 Malus domestica HOM05D001478 ORTHO05D002240 3.7e-07 58.5 53 54.7
Lsat_1_v5_gn_9_39801 Lactuca sativa HOM05D001478 ORTHO05D002240 4.9e-07 58.2 79 49.4
Cfa016996 Carpinus fangiana HOM05D001478 ORTHO05D002240 6.4e-07 57.8 89 46.1
Thhalv10016861m.g Eutrema salsugineum HOM05D001478 ORTHO05D002240 6.4e-07 57.8 73 42.5
HanXRQChr10g0286191 Helianthus annuus HOM05D001478 ORTHO05D002240 6.4e-07 57.8 81 45.7
HPP92_017908 Vanilla planifolia HOM05D001478 ORTHO05D002240 8.3e-07 57.4 62 51.6
SGA_v2.0_scaffold120G33003 Striga asiatica HOM05D001478 ORTHO05D002240 1.1e-06 57.0 52 53.8
A03p17100 Brassica napus HOM05D001478 ORTHO05D002240 1.4e-06 56.6 68 48.5
PGR102G2620 Punica granatum HOM05D001478 ORTHO05D002240 1.4e-06 56.6 43 62.8
vmacro20396 Vaccinium macrocarpon HOM05D001478 ORTHO05D002240 1.4e-06 56.6 54 53.7
SGA_v2.0_scaffold54G19457 Striga asiatica HOM05D001478 ORTHO05D002240 3.2e-06 55.5 81 45.7
CDE12G0681 Ceratophyllum demersum HOM05D001478 ORTHO05D002240 4.1e-06 55.1 89 38.2
HanXRQChr15g0464541 Helianthus annuus HOM05D001478 ORTHO05D002240 4.1e-06 55.1 43 62.8
MD03G1047600 Malus domestica HOM05D001478 ORTHO05D002240 4.1e-06 55.1 53 52.8
HPP92_018080 Vanilla planifolia HOM05D001478 ORTHO05D002240 5.4e-06 54.7 92 40.2
Migut.D00801 Erythranthe guttata HOM05D001478 ORTHO05D002240 7.1e-06 54.3 75 48.0
Hma1.2p1_0174F.1_g076590 Hydrangea macrophylla HOM05D001478 ORTHO05D002240 7.1e-06 54.3 60 51.7
Potri.013G160100 Populus trichocarpa HOM05D001478 ORTHO05D002240 7.1e-06 54.3 79 46.8
CSS0005926 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 9.2e-06 53.9 43 67.4
CSS0025074 Camellia sinensis var. sinensis HOM05D001478 ORTHO05D002240 9.2e-06 53.9 43 67.4


User provided reference genes

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