Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 1.8e-215 752.3 371 100.0
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 1.3e-197 693.0 347 96.8
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 3.7e-197 691.4 363 92.3
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 2.5e-193 678.7 366 88.3
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 1.7e-189 666.0 362 87.6
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 2.9e-189 665.2 366 88.0
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 1.1e-188 663.3 366 87.2
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 7.8e-187 657.1 366 86.6
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 1.5e-185 652.9 378 84.1
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 2.4e-175 619.0 368 80.4
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 2.0e-174 615.9 361 80.1
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 3.8e-173 611.7 347 83.3
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 1.1e-172 610.1 364 80.2
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 1.3e-170 603.2 354 81.6
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 8.7e-170 600.5 365 79.5
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 1.5e-169 599.7 365 79.2
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 4.3e-169 598.2 363 79.9
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 1.3e-168 596.7 362 79.3
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 1.3e-168 596.7 362 77.6
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 1.6e-168 596.3 364 78.6
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 6.2e-168 594.3 362 79.0
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 1.8e-167 592.8 364 78.0
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 5.3e-167 591.3 362 77.9
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.2e-166 590.1 362 77.9
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 2.0e-166 589.3 364 77.5
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.5e-166 588.2 381 75.6
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 2.2e-165 585.9 358 77.9
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 8.4e-165 583.9 392 73.5
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.6e-163 579.7 362 76.0
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 1.6e-163 579.7 363 77.7
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 2.1e-163 579.3 362 76.0
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.8e-160 568.9 374 75.1
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 4.8e-160 568.2 350 76.6
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.8e-160 568.2 374 75.1
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 4.0e-159 565.1 363 76.9
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 6.9e-159 564.3 362 74.0
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 5.8e-158 561.2 364 74.5
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 1.9e-156 556.2 361 73.4
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 4.2e-156 555.1 357 74.2
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 4.6e-155 551.6 362 72.9
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 1.8e-154 549.7 358 74.9
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 3.0e-154 548.9 322 81.1
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 3.0e-154 548.9 357 72.8
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 5.1e-154 548.1 366 71.9
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 5.1e-154 548.1 362 73.2
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 6.7e-154 547.7 336 78.6
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 8.7e-154 547.4 363 71.6
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 2.5e-153 545.8 366 71.9
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 3.3e-153 545.4 358 72.6
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 3.3e-153 545.4 362 72.9
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 7.4e-153 544.3 358 72.9
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 1.3e-152 543.5 358 71.2
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 2.1e-152 542.7 361 72.9
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 2.8e-152 542.3 362 70.2
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 1.1e-151 540.4 362 71.3
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 5.3e-151 538.1 359 71.0
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 2.0e-150 536.2 362 72.4
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 3.4e-150 535.4 361 71.5
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 3.4e-150 535.4 358 70.4
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 4.5e-150 535.0 351 72.1
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 7.6e-150 534.3 359 70.5
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 1.0e-149 533.9 358 70.9
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 2.9e-149 532.3 357 70.9
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 5.5e-148 528.1 356 70.8
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 7.2e-148 527.7 358 70.4
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 7.2e-148 527.7 358 70.4
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.2e-147 526.9 355 69.6
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 2.7e-147 525.8 357 69.2
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 2.7e-147 525.8 334 74.9
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 6.1e-147 524.6 352 71.3
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 3.9e-146 521.9 358 69.3
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 5.1e-146 521.5 376 68.9
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 5.1e-146 521.5 358 68.2
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 1.1e-145 520.4 349 71.1
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 1.5e-145 520.0 346 71.7
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 1.9e-145 519.6 359 69.4
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 5.7e-145 518.1 358 68.4
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 9.7e-145 517.3 347 71.8
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 3.7e-144 515.4 358 69.0
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 4.8e-144 515.0 379 66.8
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 1.4e-143 513.5 354 70.9
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 2.2e-141 506.1 355 67.0
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 8.5e-141 504.2 355 68.5
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 8.5e-141 504.2 384 64.6
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 8.5e-141 504.2 357 68.1
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 7.2e-140 501.1 357 68.1
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 1.6e-139 500.0 362 67.1
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.0e-138 497.3 349 68.2
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 8.8e-138 494.2 358 65.6
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 8.8e-138 494.2 358 65.6
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 1.2e-131 473.8 363 67.8
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 1.2e-131 473.8 355 62.0
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 1.0e-130 470.7 365 63.6
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 2.4e-127 459.5 351 64.4
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 2.9e-125 452.6 346 64.2
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 3.8e-125 452.2 343 61.8
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 2.0e-113 413.3 347 56.8
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.0e-101 374.4 212 80.2
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.9e-92 343.6 362 52.5
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 8.1e-83 311.6 194 77.8
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 2.4e-71 273.5 174 69.0
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 4.0e-66 256.1 219 55.7
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 3.9e-61 239.6 205 60.0
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 8.7e-61 238.4 162 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 3.3e-60 236.5 169 62.1
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 7.3e-60 235.3 206 56.8
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 4.5e-49 199.5 127 74.8
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 5.3e-34 149.4 117 59.0
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 4.2e-31 139.8 73 84.9
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 4.3e-28 129.8 115 57.4
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 1.2e-22 111.7 64 78.1


User provided reference genes

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