Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 2.1e-30 135.2 75 100.0
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 3.1e-18 94.7 78 74.4
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 2.0e-17 92.0 77 68.8
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 4.5e-17 90.9 77 68.8
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 5.9e-17 90.5 81 69.1
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 1.0e-16 89.7 79 69.6
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 7.2e-15 83.6 78 67.9
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 5.2e-13 77.4 71 59.2
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 8.8e-13 76.6 77 57.1
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 1.5e-12 75.9 80 61.2
Glyma.11G052300 Glycine max HOM05D008251 ORTHO05D010450 2.0e-12 75.5 81 64.2
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 3.4e-12 74.7 66 62.1
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 1.7e-11 72.4 74 54.1
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 1.7e-11 72.4 60 66.7
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 2.2e-11 72.0 72 58.3
MD02G1178400 Malus domestica HOM05D008251 ORTHO05D010450 2.2e-11 72.0 79 62.0
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.3e-11 70.1 72 61.1
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.3e-11 70.1 72 61.1
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.3e-11 70.1 72 61.1
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 1.1e-10 69.7 72 61.1
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 1.4e-10 69.3 67 58.2
PGSC0003DMG400024956 Solanum tuberosum HOM05D008251 ORTHO05D010450 1.8e-10 68.9 71 57.7
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 3.1e-10 68.2 80 52.5
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 4.1e-10 67.8 72 59.7
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 5.3e-10 67.4 80 51.2
TWI73G1017 Tripterygium wilfordii HOM05D008251 ORTHO05D010450 9.1e-10 66.6 73 49.3
DCAR_025755 Daucus carota HOM05D008251 ORTHO05D010450 1.2e-09 66.2 75 49.3
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.2e-09 66.2 80 50.0
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 1.2e-09 66.2 80 50.0
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 1.6e-09 65.9 74 55.4
Lalb_Chr09g0333891 Lupinus albus HOM05D008251 ORTHO05D010450 2.0e-09 65.5 85 52.9
SGA_v2.0_scaffold15G07364 Striga asiatica HOM05D000033 ORTHO05D002493 2.7e-09 65.1 66 62.1
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 4.5e-09 64.3 67 59.7
Migut.H00397 Erythranthe guttata HOM05D008251 ORTHO05D010450 4.5e-09 64.3 65 64.6
CAN.G370.14 Capsicum annuum HOM05D008251 ORTHO05D010450 7.7e-09 63.5 79 48.1
Dinv26862 Davidia involucrata HOM05D008251 ORTHO05D010450 1.0e-08 63.2 58 60.3
QL05p026832 Quercus lobata HOM05D008251 ORTHO05D010450 1.0e-08 63.2 78 51.3
Solyc02g092960.1 Solanum lycopersicum HOM05D008251 ORTHO05D010450 1.7e-08 62.4 62 59.7
Ciclev10027375m.g Citrus clementina HOM05D008251 ORTHO05D010450 2.2e-08 62.0 62 59.7
THA.LOC104819244 Tarenaya hassleriana HOM05D008251 ORTHO05D010450 2.2e-08 62.0 78 57.7
Sp2g29400 Schrenkiella parvula HOM05D008251 ORTHO05D010450 2.9e-08 61.6 72 51.4
A07p16690 Brassica napus HOM05D008251 ORTHO05D010450 3.8e-08 61.2 74 51.4
BraA07t29392Z Brassica rapa HOM05D001855 ORTHO05D002493 3.8e-08 61.2 74 51.4
BcaC06g34809 Brassica carinata HOM05D008251 ORTHO05D010450 8.5e-08 60.1 74 50.0
C07p24410 Brassica napus HOM05D008251 ORTHO05D010450 8.5e-08 60.1 74 50.0
TAR381G0778 Trochodendron aralioides HOM05D009444 ORTHO05D011524 8.5e-08 60.1 77 55.8
Manes.13G118700 Manihot esculenta HOM05D008251 ORTHO05D010450 1.1e-07 59.7 75 46.7
AL8G44070 Arabidopsis lyrata HOM05D008251 ORTHO05D010450 1.5e-07 59.3 56 58.9
CARHR280360 Cardamine hirsuta HOM05D008251 ORTHO05D010450 2.5e-07 58.5 56 60.7
Manes.13G118801 Manihot esculenta HOM05D008251 ORTHO05D010450 4.2e-07 57.8 59 57.6
Carub.0008s2724 Capsella rubella HOM05D008251 ORTHO05D010450 5.5e-07 57.4 56 57.1
AT5G67265 Arabidopsis thaliana HOM05D008251 ORTHO05D010450 9.4e-07 56.6 71 49.3
BcaB02g09949 Brassica carinata HOM05D008251 ORTHO05D010450 2.7e-06 55.1 54 59.3
Thhalv10005599m.g Eutrema salsugineum HOM05D008251 ORTHO05D010450 3.6e-06 54.7 57 57.9
arahy.Tifrunner.gnm1.ann1.UR349I Arachis hypogaea HOM05D000049 ORTHO05D000027 4.7e-06 54.3 79 51.9
CiPaw.01G013300 Carya illinoinensis HOM05D008251 ORTHO05D010450 8.0e-06 53.5 75 45.3


User provided reference genes

Program Settings