Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G094450 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 1.7e-85 319.3 162 100.0
Phvul.003G202900 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 3.4e-62 241.9 138 91.3
Glyma.17G125100 Glycine max HOM05D000434 ORTHO05D007220 2.7e-59 232.3 143 84.6
Glyma.05G042400 Glycine max HOM05D000434 ORTHO05D007220 2.5e-57 225.7 138 84.8
VMungo1215G0744 Vigna mungo HOM05D000434 ORTHO05D007220 4.3e-57 224.9 149 81.9
Lalb_Chr07g0183031 Lupinus albus HOM05D000434 ORTHO05D007220 3.2e-52 208.8 138 79.0
Psat4g061760 Pisum sativum HOM05D000434 ORTHO05D007220 7.2e-52 207.6 138 78.3
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea HOM05D000434 ORTHO05D007220 1.6e-51 206.5 138 75.4
Ca_19423_v3 Cicer arietinum L. HOM05D000434 ORTHO05D007220 4.6e-51 204.9 138 77.5
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea HOM05D000434 ORTHO05D007220 7.9e-51 204.1 138 74.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.4e-47 193.4 138 73.9
Medtr4g104680 Medicago truncatula HOM05D000434 ORTHO05D007220 4.1e-47 191.8 138 72.5
Lj4g0018547 Lotus japonicus HOM05D000434 ORTHO05D007220 1.2e-46 190.3 140 72.1
Sabra15G0108200 Salix brachista HOM05D000434 ORTHO05D007220 1.5e-46 189.9 138 71.0
TWI23G1317 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 5.9e-46 188.0 138 67.4
Potri.015G085300 Populus trichocarpa HOM05D000434 ORTHO05D007220 1.0e-45 187.2 138 69.6
TWI39G0950 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 1.0e-45 187.2 138 68.8
Thecc.03G116400 Theobroma cacao HOM05D000434 ORTHO05D007220 1.7e-45 186.4 138 68.1
COL.COLO4_20642 Corchorus olitorius HOM05D000434 ORTHO05D007220 8.5e-45 184.1 138 68.8
FAN08G1614 Fragaria x ananassa HOM05D000434 ORTHO05D007220 8.5e-45 184.1 141 68.1
FAN04G2744 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.1e-44 183.7 141 68.1
Duzib205G0335 Durio zibethinus HOM05D000434 ORTHO05D007220 1.4e-44 183.3 138 67.4
THA.LOC104824992 Tarenaya hassleriana HOM05D000434 ORTHO05D007220 1.9e-44 183.0 138 68.1
RcHm_v2.0_Chr7g0192351 Rosa chinensis HOM05D000434 ORTHO05D007220 3.2e-44 182.2 141 68.1
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 5.5e-44 181.4 138 69.6
PGR044G1593 Punica granatum HOM05D000434 ORTHO05D007220 5.5e-44 181.4 139 66.2
FAN18G4510 Fragaria x ananassa HOM05D000434 ORTHO05D007220 7.2e-44 181.0 141 67.4
Manes.06G111600 Manihot esculenta HOM05D000434 ORTHO05D007220 1.6e-43 179.9 138 65.9
Haze_07599 Corylus avellana HOM05D000434 ORTHO05D007220 2.1e-43 179.5 138 68.8
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 2.1e-43 179.5 127 75.6
TAR629G3010 Trochodendron aralioides HOM05D000434 ORTHO05D007220 2.1e-43 179.5 152 62.5
Atru.chr9.2596 Acer truncatum HOM05D000434 ORTHO05D007220 2.7e-43 179.1 138 64.5
CANSAT80G0711 Cannabis sativa HOM05D000434 ORTHO05D007220 3.6e-43 178.7 140 66.4
Dinv20591 Davidia involucrata HOM05D000434 ORTHO05D007220 3.6e-43 178.7 148 62.2
FvH4_5g06430 Fragaria vesca HOM05D000434 ORTHO05D007220 3.6e-43 178.7 141 66.7
QL10p006642 Quercus lobata HOM05D000434 ORTHO05D007220 4.6e-43 178.3 138 66.7
FAN13G1139 Fragaria x ananassa HOM05D000434 ORTHO05D007220 7.9e-43 177.6 141 66.7
MELO3C002307.2 Cucumis melo HOM05D000434 ORTHO05D007220 1.0e-42 177.2 138 63.0
CsaV3_1G008930 Cucumis sativus L. HOM05D000434 ORTHO05D007220 1.4e-42 176.8 138 63.0
Eucgr.K02783 Eucalyptus grandis HOM05D000434 ORTHO05D007220 1.4e-42 176.8 138 63.0
Lj5A131T30 Lonicera japonica HOM05D000434 ORTHO05D007220 1.8e-42 176.4 139 65.5
GSVIVG01007621001 Vitis vinifera HOM05D000434 ORTHO05D007220 1.8e-42 176.4 138 65.9
ClCG03G003080 Citrullus lanatus HOM05D000434 ORTHO05D007220 2.3e-42 176.0 138 63.8
Prupe.5G164300 Prunus persica HOM05D000434 ORTHO05D007220 2.3e-42 176.0 141 67.4
MD06G1164800 Malus domestica HOM05D000434 ORTHO05D007220 3.0e-42 175.6 141 68.1
Sed0007484 Sechium edule HOM05D000434 ORTHO05D007220 3.9e-42 175.3 138 63.8
Cpa.g.sc159.10 Carica papaya HOM05D000434 ORTHO05D007220 5.1e-42 174.9 138 66.7
Gohir.D07G060300 Gossypium hirsutum HOM05D000434 ORTHO05D007220 8.8e-42 174.1 139 65.5
Gorai.001G064000 Gossypium raimondii HOM05D000434 ORTHO05D007220 8.8e-42 174.1 139 65.5
Sp6g12320 Schrenkiella parvula HOM05D000434 ORTHO05D007220 8.8e-42 174.1 138 65.2
Ciclev10019026m.g Citrus clementina HOM05D000434 ORTHO05D007220 1.1e-41 173.7 138 64.5
Manes.14G059700 Manihot esculenta HOM05D000434 ORTHO05D007220 1.5e-41 173.3 138 63.8
CARHR258410 Cardamine hirsuta HOM05D000434 ORTHO05D007220 2.0e-41 172.9 138 65.2
CiPaw.11G018700 Carya illinoinensis HOM05D000434 ORTHO05D007220 2.0e-41 172.9 138 63.8
Gohir.A07G056000 Gossypium hirsutum HOM05D000434 ORTHO05D007220 2.0e-41 172.9 139 65.5
BcaB08g35393 Brassica carinata HOM05D000434 ORTHO05D007220 3.3e-41 172.2 138 65.2
MD14G1170100 Malus domestica HOM05D000434 ORTHO05D007220 4.3e-41 171.8 141 66.0
TAR371G0697 Trochodendron aralioides HOM05D000434 ORTHO05D007220 9.7e-41 170.6 143 62.9
BcaC04g20813 Brassica carinata HOM05D000434 ORTHO05D007220 1.3e-40 170.2 138 65.2
C09p38860 Brassica napus HOM05D000434 ORTHO05D007220 1.3e-40 170.2 138 65.2
BolC9t56752H Brassica oleracea HOM05D000434 ORTHO05D007220 1.3e-40 170.2 138 65.2
Thhalv10012812m.g Eutrema salsugineum HOM05D000434 ORTHO05D007220 1.7e-40 169.9 138 63.8
A10p08480 Brassica napus HOM05D000434 ORTHO05D007220 2.2e-40 169.5 138 65.2
BraSC37t46157Z Brassica rapa HOM05D000434 ORTHO05D007220 2.2e-40 169.5 138 65.2
Carub.0008s1022 Capsella rubella HOM05D000434 ORTHO05D007220 2.8e-40 169.1 138 63.8
Dinv38518 Davidia involucrata HOM05D000434 ORTHO05D007220 2.8e-40 169.1 139 61.9
AT5G50210 Arabidopsis thaliana HOM05D000434 ORTHO05D007220 1.1e-39 167.2 138 63.8
Aa31sc402G20 Aethionema arabicum HOM05D000434 ORTHO05D007220 1.4e-39 166.8 138 61.6
AL8G24240 Arabidopsis lyrata HOM05D000434 ORTHO05D007220 2.4e-39 166.0 138 63.0
Aqoxy5G03714 Aquilegia oxysepala HOM05D000434 ORTHO05D007220 5.3e-39 164.9 139 63.3
vmacro16649 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 6.9e-39 164.5 139 61.2
Cc04_g11340 Coffea canephora HOM05D000434 ORTHO05D007220 1.5e-38 163.3 142 60.6
Nn3g16677 Nelumbo nucifera HOM05D000434 ORTHO05D007220 3.4e-38 162.2 139 59.7
PSO063G6548 Papaver somniferum HOM05D000434 ORTHO05D007220 4.5e-38 161.8 139 59.0
Hund05601 Selenicereus undatus HOM05D000434 ORTHO05D007220 5.9e-38 161.4 139 58.3
HPP92_006247 Vanilla planifolia HOM05D000434 ORTHO05D007220 1.7e-37 159.8 139 58.3
Oeu019426.1 Olea europaea HOM05D000434 ORTHO05D007220 5.0e-37 158.3 147 56.5
Os12g0290150 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D007220 5.0e-37 158.3 139 59.0
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 6.5e-37 157.9 139 58.3
PSO754G0033 Papaver somniferum HOM05D000434 ORTHO05D007220 6.5e-37 157.9 139 57.6
Solyc03g112060.3 Solanum lycopersicum HOM05D000434 ORTHO05D007220 8.5e-37 157.5 139 59.0
Sopen03g031160 Solanum pennellii HOM05D000434 ORTHO05D007220 1.4e-36 156.8 139 58.3
EL10Ac7g17990 Beta vulgaris HOM05D000434 ORTHO05D007220 2.5e-36 156.0 153 52.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 5.5e-36 154.8 139 58.3
AUR62022128 Chenopodium quinoa HOM05D000434 ORTHO05D007220 7.2e-36 154.5 139 56.1
unitig_8.g3068 Utricularia gibba HOM05D000434 ORTHO05D007220 7.2e-36 154.5 139 64.0
Sc04g0001370 Simmondsia chinensis HOM05D000434 ORTHO05D007220 9.4e-36 154.1 138 57.2
CAN.G126.48 Capsicum annuum HOM05D000434 ORTHO05D007220 4.7e-35 151.8 138 55.8
AUR62001201 Chenopodium quinoa HOM05D000434 ORTHO05D007220 6.1e-35 151.4 139 54.7
Nitab4.5_0002522g0070 Nicotiana tabacum HOM05D000434 ORTHO05D007220 7.9e-35 151.0 138 58.0
PGSC0003DMG400018194 Solanum tuberosum HOM05D000434 ORTHO05D007220 7.9e-35 151.0 138 57.2
CSS0021677 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D007220 3.0e-34 149.1 138 58.7
Nitab4.5_0008037g0020 Nicotiana tabacum HOM05D000434 ORTHO05D007220 3.9e-34 148.7 138 58.0
Rhsim12G0168600 Rhododendron simsii HOM05D000434 ORTHO05D007220 3.9e-34 148.7 145 57.2
ATR0122G015 Amborella trichopoda HOM05D000434 ORTHO05D007220 2.0e-33 146.4 159 50.9
Migut.O00172 Erythranthe guttata HOM05D000434 ORTHO05D007220 7.4e-33 144.4 139 57.6
CDE09G1335 Ceratophyllum demersum HOM05D000434 ORTHO05D007220 9.7e-33 144.1 141 58.2
Lsat_1_v5_gn_4_79240 Lactuca sativa HOM05D000434 ORTHO05D007220 1.7e-32 143.3 139 56.8
HanXRQChr16g0504771 Helianthus annuus HOM05D000434 ORTHO05D007220 2.8e-32 142.5 157 50.3
Peaxi162Scf00089g01235 Petunia axillaris HOM05D000434 ORTHO05D007220 2.6e-30 136.0 126 57.1
SalBow5G4295 Salvia bowleyana HOM05D000434 ORTHO05D007220 7.7e-30 134.4 129 56.6
SalBow5G3182 Salvia bowleyana HOM05D000434 ORTHO05D007220 3.8e-29 132.1 129 55.8
SGA_v2.0_scaffold90G27826 Striga asiatica HOM05D000434 ORTHO05D007220 3.8e-29 132.1 130 54.6
SEGI_28653 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 4.2e-28 128.6 141 53.9
SEGI_39802 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 4.2e-28 128.6 141 53.9
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 1.1e-23 114.0 81 66.7
Pp3c22_13970 Physcomitrium patens HOM05D000434 ORTHO05D007220 1.2e-22 110.5 139 46.8
Pp3c19_15510 Physcomitrium patens HOM05D000434 ORTHO05D007220 2.7e-22 109.4 152 42.8
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis HOM05D000434 ORTHO05D007220 8.5e-21 104.4 140 49.3
CBR_g20372 Chara braunii HOM05D000434 ORTHO05D007220 2.1e-19 99.8 164 40.2
CBR_g50939 Chara braunii HOM05D000434 ORTHO05D007220 2.7e-19 99.4 162 43.8
SMO367G0357 Selaginella moellendorffii HOM05D000434 ORTHO05D007220 2.7e-19 99.4 141 43.3
Cre06.g251450 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D007220 4.4e-17 92.0 142 40.8
Mapoly0102s0006 Marchantia polymorpha HOM05D000434 ORTHO05D007220 4.4e-17 92.0 141 42.6
MCO05G483 Micromonas commoda HOM05D000434 ORTHO05D007220 2.8e-16 89.4 140 41.4
PRCOL_00006555 Prasinoderma coloniale HOM05D000434 ORTHO05D007220 2.2e-13 79.7 145 39.3
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 3.8e-13 79.0 64 71.9
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 3.8e-13 79.0 64 71.9
Actinidia08037 Actinidia chinensis HOM05D000434 ORTHO05D007220 2.1e-11 73.2 56 62.5


User provided reference genes

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