Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 1.6e-197 692.6 362 100.0
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 6.1e-152 541.2 336 86.9
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 4.4e-118 428.7 339 76.7
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 5.2e-111 405.2 350 72.9
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 3.1e-71 273.1 356 53.9
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.2e-70 271.2 355 53.8
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 1.3e-69 267.7 369 53.9
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 2.2e-69 266.9 354 52.3
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 7.4e-57 225.3 361 47.1
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 3.4e-54 216.5 375 44.3
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 1.3e-53 214.5 375 44.5
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 4.2e-36 156.4 371 38.8
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 2.1e-35 154.1 385 37.1
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 3.6e-35 153.3 382 40.1
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 6.1e-35 152.5 359 35.4
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 6.1e-35 152.5 378 37.3
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 8.0e-35 152.1 383 36.0
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 1.4e-34 151.4 355 36.3
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.3e-34 150.6 399 36.8
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.0e-33 147.5 348 36.2
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.3e-33 146.7 363 37.2
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 4.4e-33 146.4 366 37.4
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.3e-32 144.8 402 36.6
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.2e-32 144.1 364 36.5
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 2.8e-32 143.7 337 35.3
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 1.8e-31 141.0 340 36.5
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 1.8e-31 141.0 337 35.0
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 1.8e-31 141.0 337 35.0
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 4.1e-31 139.8 359 34.8
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 4.1e-31 139.8 374 36.1
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.3e-31 139.4 366 37.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 7.0e-31 139.0 370 36.8
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 1.2e-30 138.3 337 35.9
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 7.7e-30 135.6 339 35.4
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 1.3e-29 134.8 389 35.7
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 3.8e-29 133.3 352 34.9
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.5e-28 131.3 417 34.5
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.5e-28 131.3 381 33.6
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.5e-28 130.6 378 36.0
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 1.6e-27 127.9 405 36.0
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 8.0e-27 125.6 353 34.0
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.4e-26 124.8 354 33.9
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 1.5e-25 121.3 357 31.4
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 5.7e-25 119.4 290 41.0
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 9.8e-25 118.6 354 33.6
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 1.3e-24 118.2 363 32.8
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 1.3e-24 118.2 396 34.3
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.3e-24 115.5 427 33.0
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 1.1e-23 115.2 373 31.6
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 3.1e-23 113.6 299 36.1
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.1e-23 113.6 388 33.8
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.0e-22 110.9 336 33.9
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 3.5e-22 110.2 277 39.4
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.7e-21 107.8 363 32.0
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 3.8e-21 106.7 343 32.7
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 5.0e-21 106.3 381 33.6
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 1.1e-20 105.1 427 27.6
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 7.2e-20 102.4 341 33.1
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 9.5e-20 102.1 399 31.6
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 9.5e-20 102.1 363 32.8
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 1.2e-19 101.7 363 32.8
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.1e-19 100.9 337 32.0
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 1.8e-18 97.8 344 33.1
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 4.0e-18 96.7 389 29.8
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 5.2e-18 96.3 373 31.1
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 6.8e-18 95.9 336 30.7
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 6.8e-18 95.9 404 30.0
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.5e-17 94.7 399 30.6
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 1.5e-17 94.7 342 31.6
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.0e-17 94.4 392 29.3
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 2.0e-17 94.4 345 31.6
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 3.4e-17 93.6 401 31.4
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 4.4e-17 93.2 376 31.1
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 5.7e-17 92.8 415 28.7
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 7.5e-17 92.4 341 30.8
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.3e-16 91.7 415 28.0
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 1.3e-16 91.7 289 34.3
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 2.8e-16 90.5 289 33.9
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 6.3e-16 89.4 335 33.1
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.1e-15 88.6 343 31.5
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 3.1e-15 87.0 379 29.3
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 5.4e-15 86.3 411 27.0
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 7.0e-15 85.9 298 31.5
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 7.0e-15 85.9 392 29.1
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 7.0e-15 85.9 399 28.3
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-14 85.1 395 30.6
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.2e-14 85.1 405 28.1
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.6e-14 84.7 347 31.4
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 2.0e-14 84.3 365 31.5
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 2.0e-14 84.3 419 28.6
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 4.5e-14 83.2 400 27.2
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 4.5e-14 83.2 407 29.5
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.5e-14 83.2 437 26.5
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 5.9e-14 82.8 289 31.8
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.8e-14 82.4 392 28.8
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.3e-13 81.6 308 32.5
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.3e-13 80.9 320 33.1
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 2.9e-13 80.5 330 33.3
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 6.6e-13 79.3 397 26.4
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 1.5e-12 78.2 394 30.7
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.5e-12 78.2 278 34.2
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.9e-12 77.8 397 27.5
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 2.5e-12 77.4 435 26.0
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 3.3e-12 77.0 324 31.2
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 4.3e-12 76.6 344 31.7
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 7.3e-12 75.9 392 28.3
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 7.3e-12 75.9 400 29.0
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 9.5e-12 75.5 322 33.9
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 1.2e-11 75.1 341 31.4
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.8e-11 73.9 449 25.4
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.8e-11 73.9 382 30.4
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 3.6e-11 73.6 380 28.7
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 3.6e-11 73.6 396 28.5
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 4.7e-11 73.2 253 34.4
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 6.1e-11 72.8 324 30.6
MD04G1068300 Malus domestica HOM05D002977 ORTHO05D003225 1.0e-10 72.0 222 32.0
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 1.8e-10 71.2 396 26.0
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 3.0e-10 70.5 399 28.1
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 4.0e-10 70.1 349 31.8
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 4.0e-10 70.1 358 31.8
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 5.2e-10 69.7 295 30.8
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 5.2e-10 69.7 315 28.3
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 5.2e-10 69.7 380 29.2
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 8.9e-10 68.9 353 30.3
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-09 68.6 123 40.7
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-09 68.2 200 32.5
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 2.6e-09 67.4 310 29.7
Ciclev10023936m.g Citrus clementina HOM05D002977 ORTHO05D003225 3.4e-09 67.0 231 32.9
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 3.4e-09 67.0 356 28.9
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 4.4e-09 66.6 397 27.5
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.5e-09 65.9 342 29.8
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 7.5e-09 65.9 304 29.9
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 8.3e-08 62.4 291 28.2
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.1e-07 62.0 242 30.6
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 1.9e-07 61.2 285 31.6
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 1.9e-07 61.2 400 27.0
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 3.2e-07 60.5 243 31.3
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 5.4e-07 59.7 239 33.1
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 5.4e-07 59.7 279 26.2
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 5.4e-07 59.7 279 26.2
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 9.2e-07 58.9 399 25.1
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 2.0e-06 57.8 361 27.1
PSO782G0819 Papaver somniferum HOM05D002977 ORTHO05D003225 2.7e-06 57.4 172 32.0
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 4.6e-06 56.6 382 26.2


User provided reference genes

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