Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G080900 Phaseolus vulgaris HOM05D004868 ORTHO05D006030 7.0e-198 693.7 346 100.0
VMungo0331G1201 Vigna mungo HOM05D004868 ORTHO05D006030 8.1e-170 600.5 333 90.7
Lj3g0018370 Lotus japonicus HOM05D004868 ORTHO05D006030 2.4e-166 589.0 346 85.8
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea HOM05D004868 ORTHO05D006030 1.3e-162 576.6 347 84.7
Glyma.01G139000 Glycine max HOM05D004868 ORTHO05D006030 3.6e-162 575.1 348 84.2
Lalb_Chr13g0291821 Lupinus albus HOM05D004868 ORTHO05D006030 4.8e-162 574.7 343 83.4
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea HOM05D004868 ORTHO05D006030 1.8e-161 572.8 349 84.0
Lalb_Chr12g0208121 Lupinus albus HOM05D004868 ORTHO05D006030 1.1e-158 563.5 344 82.3
Glyma.03G028300 Glycine max HOM05D004868 ORTHO05D006030 1.1e-153 547.0 348 80.5
QL03p000170 Quercus lobata HOM05D004868 ORTHO05D006030 5.3e-153 544.7 350 78.0
QL03p000506 Quercus lobata HOM05D004868 ORTHO05D006030 2.0e-152 542.7 351 77.5
TPR.G7590 Trifolium pratense HOM05D004868 ORTHO05D006030 2.0e-152 542.7 348 79.0
Ca_13816_v3 Cicer arietinum L. HOM05D004868 ORTHO05D006030 1.4e-150 536.6 345 79.7
Medtr4g025410 Medicago truncatula HOM05D004868 ORTHO05D006030 2.4e-150 535.8 345 78.6
Potri.005G046300 Populus trichocarpa HOM05D004868 ORTHO05D006030 6.0e-149 531.2 336 77.7
CiPaw.07G009000 Carya illinoinensis HOM05D004868 ORTHO05D006030 3.0e-148 528.9 346 76.0
PGR004G1913 Punica granatum HOM05D004868 ORTHO05D006030 8.7e-148 527.3 339 75.5
Manes.09G157900 Manihot esculenta HOM05D004868 ORTHO05D006030 7.4e-147 524.2 343 76.4
TWI12G1223 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 7.4e-147 524.2 346 74.6
Sabra05G0042300 Salix brachista HOM05D004868 ORTHO05D006030 2.1e-146 522.7 337 76.6
TPR.G39359 Trifolium pratense HOM05D004868 ORTHO05D006030 1.8e-145 519.6 313 81.5
MD12G1234100 Malus domestica HOM05D004868 ORTHO05D006030 4.0e-145 518.5 345 74.8
AUR62005015 Chenopodium quinoa HOM05D004868 ORTHO05D006030 1.2e-144 516.9 344 75.9
FAN02G0279 Fragaria x ananassa HOM05D004868 ORTHO05D006030 3.4e-144 515.4 346 74.6
MD04G1217100 Malus domestica HOM05D004868 ORTHO05D006030 3.4e-144 515.4 351 74.1
Potri.013G034000 Populus trichocarpa HOM05D004868 ORTHO05D006030 3.4e-144 515.4 336 76.2
FAN05G2179 Fragaria x ananassa HOM05D004868 ORTHO05D006030 5.8e-144 514.6 347 75.2
FAN05G5662 Fragaria x ananassa HOM05D004868 ORTHO05D006030 5.8e-144 514.6 347 75.2
Ciclev10001724m.g Citrus clementina HOM05D004868 ORTHO05D006030 1.0e-143 513.8 353 73.1
Sed0014615 Sechium edule HOM05D004868 ORTHO05D006030 2.2e-143 512.7 344 74.7
FAN09G4706 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.5e-143 511.1 347 74.4
MELO3C010076.2 Cucumis melo HOM05D004868 ORTHO05D006030 8.4e-143 510.8 345 73.6
Gorai.007G286600 Gossypium raimondii HOM05D004868 ORTHO05D006030 4.2e-142 508.4 339 74.6
TWI36G0026 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 9.3e-142 507.3 347 71.8
ClCG03G010920 Citrullus lanatus HOM05D004868 ORTHO05D006030 1.6e-141 506.5 344 73.5
FAN14G3773 Fragaria x ananassa HOM05D004868 ORTHO05D006030 2.1e-141 506.1 347 73.2
CsaV3_1G044760 Cucumis sativus L. HOM05D004868 ORTHO05D006030 4.6e-141 505.0 349 71.3
Gohir.D11G266800 Gossypium hirsutum HOM05D004868 ORTHO05D006030 3.0e-140 502.3 336 74.4
Haze_04309 Corylus avellana HOM05D004868 ORTHO05D006030 5.1e-140 501.5 270 86.3
FvH4_6g03940 Fragaria vesca HOM05D004868 ORTHO05D006030 6.7e-140 501.1 347 72.6
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 8.7e-140 500.7 344 73.3
Sp3g03920 Schrenkiella parvula HOM05D004868 ORTHO05D006030 1.1e-139 500.4 343 73.2
Thhalv10021106m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 4.3e-139 498.4 343 74.6
TAR636G1948 Trochodendron aralioides HOM05D004868 ORTHO05D006030 4.3e-139 498.4 337 73.6
Cfa006482 Carpinus fangiana HOM05D004868 ORTHO05D006030 1.1e-137 493.8 270 85.6
ECA246G2619 Erigeron canadensis HOM05D004868 ORTHO05D006030 1.4e-137 493.4 342 71.1
Gohir.A11G257000 Gossypium hirsutum HOM05D004868 ORTHO05D006030 3.1e-137 492.3 336 73.2
Ah.04g160130 Amaranthus hybridus HOM05D004868 ORTHO05D006030 6.9e-137 491.1 273 83.9
A03p33990 Brassica napus HOM05D004868 ORTHO05D006030 9.0e-137 490.7 341 71.8
BraA03t12574Z Brassica rapa HOM05D004868 ORTHO05D006030 9.0e-137 490.7 341 71.8
Prupe.6G337200 Prunus persica HOM05D004868 ORTHO05D006030 1.2e-136 490.3 308 77.3
Ah.06g192760 Amaranthus hybridus HOM05D004868 ORTHO05D006030 2.0e-136 489.6 312 76.6
AL3G15480 Arabidopsis lyrata HOM05D004868 ORTHO05D006030 2.0e-136 489.6 339 71.1
Sed0017257 Sechium edule HOM05D004868 ORTHO05D006030 2.0e-136 489.6 343 70.8
EL10Ac4g09208 Beta vulgaris HOM05D004868 ORTHO05D006030 3.4e-136 488.8 273 83.2
BcaNung04260 Brassica carinata HOM05D004868 ORTHO05D006030 7.6e-136 487.6 343 70.0
C03p41370 Brassica napus HOM05D004868 ORTHO05D006030 1.0e-135 487.3 341 72.1
Atru.chr2.656 Acer truncatum HOM05D004868 ORTHO05D006030 1.3e-135 486.9 346 69.4
CAN.G134.187 Capsicum annuum HOM05D004868 ORTHO05D006030 1.3e-135 486.9 342 71.6
BraA06t26695Z Brassica rapa HOM05D004868 ORTHO05D006030 1.7e-135 486.5 346 69.4
CANSAT54G1013 Cannabis sativa HOM05D004868 ORTHO05D006030 1.7e-135 486.5 263 86.3
Aa31LG5G15350 Aethionema arabicum HOM05D004868 ORTHO05D006030 2.2e-135 486.1 343 71.1
BolC3t16420H Brassica oleracea HOM05D004868 ORTHO05D006030 2.2e-135 486.1 341 71.8
Duzib177G0825 Durio zibethinus HOM05D004868 ORTHO05D006030 2.2e-135 486.1 336 72.6
SalBow2G0736 Salvia bowleyana HOM05D004868 ORTHO05D006030 2.9e-135 485.7 337 71.2
A05p42480 Brassica napus HOM05D004868 ORTHO05D006030 3.8e-135 485.3 341 72.1
BraA05t23004Z Brassica rapa HOM05D004868 ORTHO05D006030 3.8e-135 485.3 341 72.1
C07p40470 Brassica napus HOM05D004868 ORTHO05D006030 5.0e-135 485.0 343 69.7
BolC7t44582H Brassica oleracea HOM05D004868 ORTHO05D006030 5.0e-135 485.0 343 69.7
BcaC01g04334 Brassica carinata HOM05D004868 ORTHO05D006030 6.5e-135 484.6 341 71.6
RcHm_v2.0_Chr3g0452511 Rosa chinensis HOM05D004868 ORTHO05D006030 6.5e-135 484.6 286 80.8
DCAR_022833 Daucus carota HOM05D004868 ORTHO05D006030 1.4e-134 483.4 263 85.6
SGA_v2.0_scaffold146G36132 Striga asiatica HOM05D004868 ORTHO05D006030 1.9e-134 483.0 338 70.4
AT3G05100 Arabidopsis thaliana HOM05D004868 ORTHO05D006030 3.2e-134 482.3 343 69.4
MSTRG.13789 Avicennia marina HOM05D004868 ORTHO05D006030 9.3e-134 480.7 340 70.3
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla HOM05D004868 ORTHO05D006030 1.2e-133 480.3 347 71.2
BcaNung04261 Brassica carinata HOM05D004868 ORTHO05D006030 2.1e-133 479.6 343 70.0
Carub.0003s0434 Capsella rubella HOM05D004868 ORTHO05D006030 2.7e-133 479.2 339 70.5
BcaB04g21374 Brassica carinata HOM05D004868 ORTHO05D006030 3.6e-133 478.8 343 71.1
Nitab4.5_0002840g0160 Nicotiana tabacum HOM05D004868 ORTHO05D006030 4.6e-133 478.4 346 70.8
Rhsim05G0148800 Rhododendron simsii HOM05D004868 ORTHO05D006030 4.6e-133 478.4 269 85.5
Hund07000 Selenicereus undatus HOM05D004868 ORTHO05D006030 4.6e-133 478.4 285 80.4
Carub.0006s2543 Capsella rubella HOM05D004868 ORTHO05D006030 6.1e-133 478.0 340 70.6
HanXRQChr05g0161431 Helianthus annuus HOM05D004868 ORTHO05D006030 6.1e-133 478.0 344 68.9
Nitab4.5_0002361g0200 Nicotiana tabacum HOM05D004868 ORTHO05D006030 6.1e-133 478.0 346 70.5
CiPaw.08G177900 Carya illinoinensis HOM05D004868 ORTHO05D006030 7.9e-133 477.6 263 85.6
Aa31LG11G8840 Aethionema arabicum HOM05D004868 ORTHO05D006030 1.8e-132 476.5 338 71.0
Peaxi162Scf00225g00143 Petunia axillaris HOM05D004868 ORTHO05D006030 2.3e-132 476.1 335 71.6
Cc02_g31280 Coffea canephora HOM05D004868 ORTHO05D006030 8.8e-132 474.2 348 69.3
Eucgr.H04401 Eucalyptus grandis HOM05D004868 ORTHO05D006030 8.8e-132 474.2 335 71.0
BolC5t34872H Brassica oleracea HOM05D004868 ORTHO05D006030 1.1e-131 473.8 337 71.2
Solyc01g098040.3 Solanum lycopersicum HOM05D004868 ORTHO05D006030 1.5e-131 473.4 263 83.7
CSS0010529 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 2.5e-131 472.6 312 75.6
Sopen01g041620 Solanum pennellii HOM05D004868 ORTHO05D006030 2.5e-131 472.6 263 83.7
CSS0039857 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 3.3e-131 472.2 306 74.5
PGSC0003DMG400022466 Solanum tuberosum HOM05D004868 ORTHO05D006030 3.3e-131 472.2 263 83.3
CARHR185710 Cardamine hirsuta HOM05D004868 ORTHO05D006030 5.7e-131 471.5 344 68.6
Actinidia33836 Actinidia chinensis HOM05D004868 ORTHO05D006030 7.4e-131 471.1 338 72.8
Thhalv10004543m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 7.4e-131 471.1 338 69.2
CSS0028974 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.3e-130 470.3 306 74.5
Migut.B00327 Erythranthe guttata HOM05D004868 ORTHO05D006030 3.7e-130 468.8 341 70.1
CSS0000773 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.8e-129 466.5 270 81.5
Lsat_1_v5_gn_9_40320 Lactuca sativa HOM05D004868 ORTHO05D006030 3.1e-129 465.7 260 81.9
PSO170G6220 Papaver somniferum HOM05D004868 ORTHO05D006030 3.1e-129 465.7 341 69.5
PSO210G5882 Papaver somniferum HOM05D004868 ORTHO05D006030 6.9e-129 464.5 341 69.2
Thecc.05G291500 Theobroma cacao HOM05D004868 ORTHO05D006030 9.1e-129 464.2 336 69.6
MSTRG.12666 Avicennia marina HOM05D004868 ORTHO05D006030 1.7e-127 459.9 350 68.6
Sp2g20350 Schrenkiella parvula HOM05D004868 ORTHO05D006030 1.7e-127 459.9 321 71.7
Aqoxy5G00612 Aquilegia oxysepala HOM05D004868 ORTHO05D006030 5.0e-127 458.4 273 79.9
GSVIVG01021894001 Vitis vinifera HOM05D004868 ORTHO05D006030 5.0e-127 458.4 242 87.6
Oeu012475.1 Olea europaea HOM05D004868 ORTHO05D006030 4.2e-126 455.3 337 69.4
HanXRQChr14g0447091 Helianthus annuus HOM05D004868 ORTHO05D006030 7.2e-126 454.5 264 80.3
C05p62140 Brassica napus HOM05D004868 ORTHO05D006030 1.0e-124 450.7 342 67.5
Lj9A672G84 Lonicera japonica HOM05D004868 ORTHO05D006030 1.3e-122 443.7 242 85.5
MBI18_g14729_MAGBIO Magnolia biondii HOM05D004868 ORTHO05D006030 2.4e-121 439.5 348 65.2
ATR0618G246 Amborella trichopoda HOM05D004868 ORTHO05D006030 2.0e-120 436.4 264 78.0
Psat7g231080 Pisum sativum HOM05D004868 ORTHO05D006030 7.7e-120 434.5 217 92.2
AUR62000953 Chenopodium quinoa HOM05D004868 ORTHO05D006030 2.9e-119 432.6 233 87.1
Os07g0667400 Oryza sativa ssp. japonica HOM05D004868 ORTHO05D006030 6.1e-117 424.9 272 74.6
Zm00001eb110980 Zea mays HOM05D004868 ORTHO05D006030 8.0e-117 424.5 274 74.1
unitig_8.g3689 Utricularia gibba HOM05D004868 ORTHO05D006030 5.7e-115 418.3 341 62.2
Sabra13G0033200 Salix brachista HOM05D004868 ORTHO05D006030 1.3e-114 417.2 240 84.2
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 2.2e-114 416.4 216 88.9
Dinv02605 Davidia involucrata HOM05D004868 ORTHO05D006030 1.3e-111 407.1 273 72.9
Nn4g26018 Nelumbo nucifera HOM05D004868 ORTHO05D006030 1.3e-111 407.1 219 85.4
vmacro05392 Vaccinium macrocarpon HOM05D004868 ORTHO05D006030 1.5e-110 403.7 228 84.2
Lj7C479T1 Lonicera japonica HOM05D004868 ORTHO05D006030 9.4e-110 401.0 217 84.3
SEGI_16580 Sequoiadendron giganteum HOM05D004868 ORTHO05D006030 1.8e-105 386.7 285 66.7
HPP92_011336 Vanilla planifolia HOM05D004868 ORTHO05D006030 3.1e-105 386.0 342 60.2
HPP92_016882 Vanilla planifolia HOM05D004868 ORTHO05D006030 1.2e-104 384.0 339 61.4
Dinv02602 Davidia involucrata HOM05D004868 ORTHO05D006030 1.7e-103 380.2 208 84.6
SHI18309 Sapria himalayana HOM05D004868 ORTHO05D006030 1.0e-100 370.9 217 77.0
SMO203G0024 Selaginella moellendorffii HOM05D004868 ORTHO05D006030 2.5e-94 349.7 333 54.4
Oeu027042.1 Olea europaea HOM05D004868 ORTHO05D006030 6.1e-93 345.1 302 62.3
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis HOM05D004868 ORTHO05D006030 1.1e-89 334.3 335 54.3
TAR365G1069 Trochodendron aralioides HOM05D004868 ORTHO05D006030 2.1e-85 320.1 247 68.0
Pp3c9_1110 Physcomitrium patens HOM05D004868 ORTHO05D006030 1.9e-81 307.0 233 62.7
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 2.3e-76 290.0 159 83.6
Cpa.g.c47757 Carica papaya HOM05D004868 ORTHO05D006030 5.2e-76 288.9 154 86.4
BcaC05g29994 Brassica carinata HOM05D004868 ORTHO05D006030 4.1e-73 279.3 217 65.4
A06p37760 Brassica napus HOM05D004868 ORTHO05D006030 1.0e-71 274.6 223 62.8
CARHR079420 Cardamine hirsuta HOM05D004868 ORTHO05D006030 1.1e-70 271.2 220 65.0
CDE08G0242 Ceratophyllum demersum HOM05D004868 ORTHO05D006030 8.1e-69 265.0 252 57.5
Sc09g0003690 Simmondsia chinensis HOM05D004868 ORTHO05D006030 3.7e-66 256.1 156 74.4
Nn3g21303 Nelumbo nucifera HOM05D004868 ORTHO05D006030 1.4e-65 254.2 220 60.9
CDE02G4194 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 2.1e-53 213.8 129 77.5
HPP92_028573 Vanilla planifolia HOM05D004868 ORTHO05D006030 6.9e-52 208.8 147 67.3
BcaB04g19280 Brassica carinata HOM05D004868 ORTHO05D006030 9.6e-38 161.8 183 51.9
BcaNung04262 Brassica carinata HOM05D004868 ORTHO05D027635 8.2e-21 105.5 125 53.6
Lsat_1_v5_gn_5_121600 Lactuca sativa HOM05D004868 ORTHO05D027635 3.2e-17 93.6 81 56.8
Lj7C479T9 Lonicera japonica HOM05D004868 ORTHO05D027635 1.2e-16 91.7 129 49.6
BolC1t05715H Brassica oleracea HOM05D004868 ORTHO05D006030 3.0e-15 87.0 49 75.5
SHI18307 Sapria himalayana HOM05D004868 ORTHO05D027635 4.3e-14 83.2 131 41.2


User provided reference genes

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