Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 4.2e-184 647.9 331 100.0
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 4.7e-183 644.4 331 99.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.2e-180 635.6 331 97.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.1e-179 631.7 331 97.3
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.1e-179 631.7 331 97.3
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.8e-174 615.9 331 95.2
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 4.1e-171 604.7 331 93.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.7e-170 602.1 327 93.9
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-169 599.7 331 92.1
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 5.0e-169 597.8 337 92.0
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 5.0e-169 597.8 327 93.0
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.0e-169 597.8 331 91.8
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.5e-168 595.5 331 91.2
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.5e-165 586.3 327 90.8
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.4e-165 584.7 327 91.4
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.7e-164 582.8 328 89.9
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.9e-164 582.0 332 89.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 3.7e-164 581.6 329 90.3
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 6.4e-164 580.9 328 89.6
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 8.3e-164 580.5 330 89.7
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.1e-163 580.1 328 89.6
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.4e-163 578.9 332 89.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 9.2e-163 577.0 332 89.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.0e-162 575.9 328 89.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.0e-161 573.5 335 88.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.0e-161 573.5 335 88.4
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.3e-161 573.2 329 88.1
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 5.0e-161 571.2 325 89.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.0e-161 571.2 332 88.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.0e-161 571.2 327 89.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 6.6e-161 570.9 328 88.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.8e-159 565.5 327 88.1
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 87.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.0e-159 563.9 329 88.1
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.0e-158 563.5 332 86.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.0e-158 563.5 326 87.7
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 325 89.2
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 332 86.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.1e-158 562.0 329 88.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.2e-158 561.2 332 86.4
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 8.9e-158 560.5 327 86.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.4e-157 558.5 332 85.2
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 86.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 85.2
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.2e-156 555.8 328 85.7
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 84.3
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.9e-156 554.7 327 86.2
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.9e-156 554.7 327 86.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 84.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 86.7
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 8.3e-156 553.9 327 85.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 84.6
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 332 84.6
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.1e-155 553.5 327 85.9
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.1e-155 553.5 332 84.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.9e-155 552.7 332 85.2
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 332 84.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 4.1e-155 551.6 326 85.9
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 5.4e-155 551.2 373 79.1
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 7.0e-155 550.8 328 86.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 83.4
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 9.2e-155 550.4 329 85.4
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.6e-154 549.7 331 84.3
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.6e-154 549.7 329 85.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.7e-154 548.9 332 83.7
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 2.7e-154 548.9 329 85.1
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.7e-154 548.9 325 85.8
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.5e-154 548.5 333 84.1
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 4.6e-154 548.1 329 84.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 4.6e-154 548.1 329 84.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 4.6e-154 548.1 329 84.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 4.6e-154 548.1 329 84.8
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.6e-154 548.1 386 76.7
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.3e-153 546.6 329 84.8
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.7e-153 546.2 329 84.8
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.7e-153 546.2 328 83.8
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.7e-153 546.2 329 85.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.9e-153 545.0 327 87.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.9e-153 545.0 331 84.6
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 6.6e-153 544.3 359 78.3
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.1e-152 543.5 329 84.2
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.1e-152 543.5 331 84.0
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.1e-152 543.5 333 83.5
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.3e-152 541.6 327 83.8
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 5.6e-152 541.2 327 84.1
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 7.3e-152 540.8 329 83.6
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 7.3e-152 540.8 328 83.2
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.6e-151 539.7 331 82.5
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-150 534.3 331 82.8
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-150 534.3 331 82.8
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 9.8e-149 530.4 331 81.0
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 9.8e-149 530.4 455 65.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.9e-148 528.9 331 80.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 3.7e-148 528.5 329 82.1
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-147 526.9 314 85.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.1e-146 522.7 304 87.5
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 7.8e-146 520.8 336 82.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.9e-145 518.5 330 82.1
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.6e-143 513.1 327 79.8
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.8e-142 509.6 331 80.4
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 4.0e-142 508.4 328 79.3
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 4.0e-142 508.4 291 86.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.9e-140 501.5 332 80.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 7.8e-138 494.2 329 75.1
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.3e-137 493.4 330 75.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.4e-134 482.6 302 83.4
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-134 481.1 377 70.0
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.1e-131 473.8 325 73.2
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.2e-130 470.3 330 75.8
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 6.9e-126 454.5 279 82.4
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 9.0e-126 454.1 329 73.9
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.9e-124 449.1 335 72.8
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 9.9e-117 424.1 234 91.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 2.7e-114 416.0 323 69.0
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.3e-111 407.1 330 63.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 3.7e-111 405.6 324 60.8
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.8e-111 405.2 317 63.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.3e-105 386.3 233 82.0
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.6e-101 372.9 274 71.5
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.7e-100 370.2 321 62.9
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-93 347.1 197 89.8
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.7e-93 344.7 338 62.1
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.8e-89 333.6 335 59.4
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.3e-89 333.2 239 69.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-88 330.9 220 80.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-87 327.4 229 75.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 6.3e-87 325.1 220 78.6
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-83 314.3 220 78.2
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 8.8e-81 304.7 167 89.8
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.3e-76 290.8 339 45.4
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 4.8e-71 272.3 165 86.1
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 6.5e-68 261.9 329 51.1
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.6e-66 257.3 165 78.8
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.7e-66 256.5 268 55.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.2e-59 232.6 135 86.7
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-53 214.5 130 85.4
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.2e-42 177.9 162 62.3
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.1e-42 177.2 103 85.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 8.9e-41 171.8 149 60.4
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 5.4e-38 162.5 205 49.8
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-37 161.0 103 80.6
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 3.0e-36 156.8 90 90.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.9e-35 154.1 89 83.1
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-34 150.2 92 85.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.9e-31 140.2 88 77.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.4e-30 137.9 80 86.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-29 133.7 69 88.4
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.0e-28 130.2 74 86.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.6e-28 129.0 77 88.3
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 2.8e-26 123.6 72 80.6
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.2e-25 119.4 72 86.1
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.9e-25 118.6 75 76.0
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 3.2e-22 110.2 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.3e-19 99.8 67 80.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 2.6e-16 90.5 65 76.9
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.5e-11 74.7 85 54.1
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 3.4e-08 63.5 48 68.8


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