Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 1.5e-173 612.8 319 100.0
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 2.8e-148 528.9 346 83.5
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 7.5e-146 520.8 320 86.9
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 1.5e-138 496.5 336 82.1
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 1.7e-129 466.5 316 78.8
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 1.7e-126 456.4 312 79.5
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 3.0e-126 455.7 318 78.0
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 3.9e-126 455.3 320 77.2
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 9.6e-125 450.7 318 78.9
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 3.5e-119 432.2 320 76.6
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 8.7e-118 427.6 320 73.4
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 1.1e-117 427.2 320 73.8
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 1.3e-113 413.7 281 79.7
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 1.1e-109 400.6 312 72.1
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 3.7e-92 342.4 321 62.3
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 1.1e-85 320.9 322 57.5
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 1.1e-85 320.9 322 57.5
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 1.1e-85 320.9 322 57.5
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 1.6e-84 317.0 327 57.2
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 1.8e-83 313.5 313 58.5
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 4.2e-80 302.4 325 55.7
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 4.2e-80 302.4 315 56.8
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 3.6e-79 299.3 314 58.6
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 6.1e-79 298.5 313 57.8
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 2.3e-78 296.6 313 57.8
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 1.5e-77 293.9 303 55.1
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 6.3e-76 288.5 316 53.8
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 8.2e-76 288.1 321 53.3
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.1e-75 287.7 304 57.6
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.1e-75 287.7 315 54.6
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 7.7e-74 281.6 389 47.3
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 7.7e-74 281.6 300 53.3
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.4e-72 277.3 373 48.8
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 2.5e-72 276.6 317 53.3
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 4.2e-72 275.8 400 45.5
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 5.5e-72 275.4 314 51.9
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 9.4e-72 274.6 308 53.6
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 2.7e-71 273.1 311 52.4
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 1.3e-68 264.2 314 52.9
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 3.1e-67 259.6 327 49.5
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 7.0e-67 258.5 323 49.8
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 7.0e-67 258.5 315 52.4
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 4.5e-66 255.8 285 54.0
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 2.2e-65 253.4 311 51.8
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 2.2e-65 253.4 311 51.1
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 2.9e-65 253.1 307 51.5
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 8.5e-65 251.5 307 51.1
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 1.1e-64 251.1 306 50.7
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 1.9e-64 250.4 305 50.8
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 6.1e-63 245.4 335 48.1
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 1.8e-62 243.8 279 52.0
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 1.8e-62 243.8 314 47.8
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 3.0e-62 243.0 267 53.9
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 3.3e-61 239.6 312 50.6
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 4.4e-61 239.2 323 46.4
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 5.7e-61 238.8 312 49.7
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 1.3e-60 237.7 313 47.9
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 1.2e-58 231.1 307 48.2
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 1.6e-58 230.7 334 45.8
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 5.9e-58 228.8 315 47.6
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 3.8e-57 226.1 314 48.7
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 8.5e-57 224.9 293 46.1
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 1.6e-55 220.7 299 46.8
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 1.4e-54 217.6 273 48.7
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.4e-54 217.6 287 48.1
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 9.8e-53 211.5 188 61.7
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 1.7e-52 210.7 299 45.2
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 2.2e-52 210.3 189 60.8
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 2.8e-52 209.9 311 44.1
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 4.5e-50 202.6 344 41.6
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 3.8e-49 199.5 268 47.0
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 2.7e-47 193.4 383 39.7
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 4.7e-47 192.6 283 45.9
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 3.0e-46 189.9 343 39.4
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 3.0e-46 189.9 346 39.0
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 1.2e-45 188.0 327 42.5
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 2.2e-44 183.7 287 41.5
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 4.9e-44 182.6 301 42.5
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 2.4e-43 180.3 295 44.1
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 8.6e-41 171.8 311 42.8
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-39 167.5 222 50.0
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 1.8e-38 164.1 269 42.8
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 4.4e-37 159.5 185 52.4
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 8.3e-36 155.2 93 77.4
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 1.4e-35 154.5 308 40.6
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 5.6e-32 142.5 123 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 3.6e-31 139.8 258 42.6
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 2.6e-29 133.7 83 74.7
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 5.8e-29 132.5 100 66.0
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 3.2e-27 126.7 182 47.3
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 9.2e-27 125.2 301 34.9
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 1.0e-25 121.7 190 41.6
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 2.3e-22 110.5 130 50.8
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 6.4e-20 102.4 196 39.8
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 7.8e-18 95.5 50 88.0
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 2.8e-15 87.0 171 39.2
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 1.7e-09 67.8 175 36.6
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 6.6e-09 65.9 40 80.0
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.6e-07 61.2 57 61.4


User provided reference genes

Program Settings