Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.8e-229 798.9 407 100.0
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 4.6e-164 581.6 363 85.1
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 3.4e-143 512.3 435 70.6
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.1e-130 470.7 425 65.4
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 5.7e-106 388.7 429 55.5
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 2.3e-91 340.1 410 51.2
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 1.9e-85 320.5 413 49.9
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 6.8e-83 312.0 412 48.5
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.1e-80 304.7 409 47.7
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 1.4e-80 304.3 408 48.0
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 2.1e-76 290.4 409 47.4
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 8.0e-76 288.5 427 45.7
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 1.0e-75 288.1 427 45.4
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 6.8e-75 285.4 421 45.6
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 2.8e-68 263.5 408 45.8
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 4.6e-55 219.5 404 38.6
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.3e-54 218.0 403 38.7
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 1.5e-50 204.5 421 38.0
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 1.1e-48 198.4 420 35.7
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.4e-48 198.0 427 35.8
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 2.3e-46 190.7 426 37.1
arahy.Tifrunner.gnm1.ann1.W084UE Arachis hypogaea HOM05D003726 ORTHO05D003520 5.6e-45 186.0 386 39.1
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.2e-44 184.9 424 35.8
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 1.1e-43 181.8 416 36.1
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.4e-43 181.4 434 36.2
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 1.8e-43 181.0 378 39.2
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.2e-42 178.3 427 34.9
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.3e-38 164.9 429 33.8
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 2.5e-37 160.6 411 33.8
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 9.6e-37 158.7 428 32.5
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 1.4e-35 154.8 423 33.3
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 1.8e-35 154.5 427 32.8
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 5.3e-35 152.9 408 33.3
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.3e-35 152.9 425 33.4
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 6.9e-35 152.5 414 30.2
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.2e-34 151.8 408 33.8
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.6e-34 150.6 419 32.5
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.4e-34 149.8 418 34.0
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 7.6e-34 149.1 421 32.3
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 1.3e-33 148.3 303 39.9
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.9e-33 146.4 427 31.6
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.4e-32 144.8 417 32.9
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.9e-32 144.4 417 32.9
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.4e-32 144.1 415 33.0
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 4.2e-32 143.3 127 58.3
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 4.2e-32 143.3 415 31.8
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.5e-31 140.2 409 33.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 3.5e-31 140.2 426 32.9
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 7.8e-31 139.0 405 33.1
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.9e-30 136.7 422 31.3
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.1e-30 136.3 412 31.8
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 7.3e-29 132.5 362 34.5
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.6e-28 130.2 413 29.5
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.8e-27 127.9 362 34.3
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.4e-27 127.5 332 35.2
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 9.0e-27 125.6 428 31.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 2.0e-26 124.4 433 29.8
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.0e-26 124.4 406 29.6
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.6e-26 124.0 435 29.9
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 3.4e-26 123.6 419 30.3
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.2e-25 120.9 470 29.1
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.9e-24 117.9 439 27.3
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 5.4e-24 116.3 415 29.2
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.1e-24 115.9 419 29.4
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 3.5e-23 113.6 438 27.4
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 4.6e-23 113.2 406 30.0
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 6.0e-23 112.8 412 27.4
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 3.9e-22 110.2 430 28.1
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 6.7e-22 109.4 189 36.0
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.1e-21 108.6 422 27.7
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.3e-21 106.7 417 28.1
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 4.3e-21 106.7 414 26.3
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.3e-20 105.1 423 27.2
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.3e-20 105.1 414 26.1
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.6e-20 104.8 403 28.0
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-20 104.8 422 27.7
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 8.1e-20 102.4 422 28.7
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.1e-19 100.5 412 26.9
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 3.1e-19 100.5 190 39.5
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 4.0e-19 100.1 412 27.4
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.0e-19 100.1 422 28.4
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.3e-19 99.8 407 27.5
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.2e-18 98.6 421 28.3
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.5e-18 98.2 431 28.8
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 4.5e-18 96.7 303 31.0
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 7.6e-18 95.9 413 27.8
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.3e-17 95.1 310 31.6
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 2.2e-17 94.4 434 27.0
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 2.9e-17 94.0 203 35.5
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.5e-17 92.8 420 26.9
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 6.5e-17 92.8 423 27.4
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.1e-16 92.0 432 26.9
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.4e-16 91.7 423 28.1
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 3.2e-16 90.5 204 36.8
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 3.2e-16 90.5 342 33.0
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 4.2e-16 90.1 292 30.8
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 4.2e-16 90.1 165 36.4
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.2e-16 90.1 416 27.6
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.5e-16 89.7 293 33.1
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-15 88.6 410 30.0
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.6e-15 88.2 412 26.0
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 1.6e-15 88.2 435 27.6
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 2.7e-15 87.4 435 26.4
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 2.7e-15 87.4 406 27.6
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 3.5e-15 87.0 302 31.5
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 3.5e-15 87.0 217 35.5
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 3.5e-15 87.0 217 35.5
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 6.0e-15 86.3 168 34.5
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 1.0e-14 85.5 195 33.3
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 1.3e-14 85.1 422 28.2
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 1.3e-14 85.1 413 28.1
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.8e-14 84.7 421 26.8
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.0e-14 84.0 391 28.1
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 3.0e-14 84.0 437 27.2
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 8.7e-14 82.4 289 30.4
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.1e-13 82.0 245 35.5
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 1.1e-13 82.0 420 27.6
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 1.9e-13 81.3 410 26.3
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.5e-13 80.9 344 27.6
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.5e-13 80.9 442 27.1
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 5.7e-13 79.7 429 26.1
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 5.7e-13 79.7 286 27.6
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 9.6e-13 79.0 419 25.5
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 9.6e-13 79.0 204 34.3
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 1.3e-12 78.6 235 31.1
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.1e-12 77.8 428 25.7
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 2.1e-12 77.8 418 26.3
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 3.7e-12 77.0 216 30.6
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 6.2e-12 76.3 176 35.2
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 1.1e-11 75.5 415 26.0
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 1.1e-11 75.5 232 31.9
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.1e-11 75.5 423 27.0
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.8e-11 74.7 345 25.8
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 3.1e-11 73.9 110 43.6
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 4.1e-11 73.6 415 26.0
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.1e-11 73.6 345 25.8
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.1e-11 73.6 204 35.3
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 5.3e-11 73.2 431 25.1
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.5e-10 71.6 433 25.2
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 2.0e-10 71.2 412 29.1
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 4.5e-10 70.1 437 24.3
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 5.8e-10 69.7 216 32.9
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 1.0e-09 68.9 432 25.2
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 1.3e-09 68.6 339 25.7
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.7e-09 68.2 322 28.0
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 1.7e-09 68.2 286 30.1
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 1.7e-09 68.2 322 26.1
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.9e-09 67.4 216 32.4
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 3.8e-09 67.0 429 24.2
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 5.0e-09 66.6 243 29.2
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 8.4e-09 65.9 149 30.2
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 1.1e-08 65.5 452 24.6
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.1e-08 65.5 447 23.5
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 2.5e-08 64.3 421 26.1
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 4.2e-08 63.5 243 28.8
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 7.1e-08 62.8 148 33.8
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 7.1e-08 62.8 324 25.6
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 7.1e-08 62.8 406 26.1
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 7.1e-08 62.8 415 25.5
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.2e-07 62.0 414 25.4
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 2.1e-07 61.2 409 24.4
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 2.7e-07 60.8 450 23.3
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 3.5e-07 60.5 188 29.8
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 1.0e-06 58.9 413 24.9
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 1.3e-06 58.5 175 32.6
Gohir.A04G091850 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.3e-06 58.5 203 34.0
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 1.8e-06 58.2 174 29.9
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.8e-06 58.2 287 28.6
PSO384G5133 Papaver somniferum HOM05D003726 ORTHO05D003520 2.3e-06 57.8 359 25.1
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 3.0e-06 57.4 456 24.3
FAN21G2593 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.0e-06 57.4 129 38.8
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 5.1e-06 56.6 283 27.2
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 8.7e-06 55.8 295 28.1


User provided reference genes

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