Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G076100 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 7.3e-124 447.2 221 100.0
VMungo0331G2046 Vigna mungo HOM05D004149 ORTHO05D005028 2.8e-115 418.7 218 92.7
Glyma.03G056500 Glycine max HOM05D004149 ORTHO05D005028 5.3e-98 361.3 219 83.6
Lj3g0002740 Lotus japonicus HOM05D004149 ORTHO05D005028 8.7e-93 344.0 216 77.3
Ca_20283_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 3.7e-91 338.6 224 74.1
Lalb_Chr07g0193651 Lupinus albus HOM05D004149 ORTHO05D005028 1.6e-86 323.2 221 73.3
Psat7g245760 Pisum sativum HOM05D004149 ORTHO05D005028 8.7e-85 317.4 219 73.1
arahy.Tifrunner.gnm1.ann1.JHY1NE Arachis hypogaea HOM05D004149 ORTHO05D005028 4.3e-84 315.1 222 70.7
TPR.G13346 Trifolium pratense HOM05D004149 ORTHO05D005028 5.7e-84 314.7 219 71.7
arahy.Tifrunner.gnm1.ann1.CPEN6V Arachis hypogaea HOM05D004149 ORTHO05D005028 9.7e-84 313.9 226 70.4
Medtr4g015610 Medicago truncatula HOM05D004149 ORTHO05D005028 1.3e-83 313.5 219 74.0
QL07p035253 Quercus lobata HOM05D004149 ORTHO05D005028 9.0e-82 307.4 223 70.0
GSVIVG01011172001 Vitis vinifera HOM05D004149 ORTHO05D005028 9.0e-82 307.4 218 69.7
Sed0021100 Sechium edule HOM05D004149 ORTHO05D005028 1.2e-81 307.0 218 67.0
CSS0009567 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 2.6e-81 305.8 221 68.8
Dinv14509 Davidia involucrata HOM05D004149 ORTHO05D005028 1.7e-80 303.1 219 68.9
MELO3C009158.2 Cucumis melo HOM05D004149 ORTHO05D005028 2.9e-80 302.4 221 67.0
CsaV3_3G033680 Cucumis sativus L. HOM05D004149 ORTHO05D005028 2.5e-79 299.3 221 66.5
CiPaw.09G210500 Carya illinoinensis HOM05D004149 ORTHO05D005028 1.2e-78 297.0 219 68.9
ClCG10G022210 Citrullus lanatus HOM05D004149 ORTHO05D005028 1.2e-78 297.0 232 64.7
Lsat_1_v5_gn_5_149460 Lactuca sativa HOM05D004149 ORTHO05D005028 1.8e-77 293.1 222 67.6
Actinidia11575 Actinidia chinensis HOM05D004149 ORTHO05D005028 6.7e-77 291.2 226 65.9
Nitab4.5_0000261g0010 Nicotiana tabacum HOM05D004149 ORTHO05D005028 1.1e-76 290.4 219 65.8
Migut.J00152 Erythranthe guttata HOM05D004149 ORTHO05D005028 4.3e-76 288.5 230 66.5
Haze_21017 Corylus avellana HOM05D004149 ORTHO05D005028 9.7e-76 287.3 222 67.6
PGSC0003DMG400004449 Solanum tuberosum HOM05D004149 ORTHO05D005028 9.7e-76 287.3 222 65.8
Nitab4.5_0002020g0030 Nicotiana tabacum HOM05D004149 ORTHO05D005028 1.3e-75 287.0 218 64.7
Cfa017194 Carpinus fangiana HOM05D004149 ORTHO05D005028 1.7e-75 286.6 222 66.7
Rhsim05G0216800 Rhododendron simsii HOM05D004149 ORTHO05D005028 2.8e-75 285.8 235 63.8
HanXRQChr13g0406611 Helianthus annuus HOM05D004149 ORTHO05D005028 3.7e-75 285.4 227 63.4
Nn2g10866 Nelumbo nucifera HOM05D004149 ORTHO05D005028 3.7e-75 285.4 218 65.6
SGA_v2.0_scaffold75G25021 Striga asiatica HOM05D004149 ORTHO05D005028 3.7e-75 285.4 228 66.2
Potri.016G117600 Populus trichocarpa HOM05D004149 ORTHO05D005028 4.8e-75 285.0 229 65.1
Sopen09g001490 Solanum pennellii HOM05D004149 ORTHO05D005028 4.8e-75 285.0 218 64.7
Cc06_g01230 Coffea canephora HOM05D004149 ORTHO05D005028 1.4e-74 283.5 222 64.9
unitig_578.g15899 Utricularia gibba HOM05D004149 ORTHO05D005028 2.4e-74 282.7 224 65.2
Sc22g0002520 Simmondsia chinensis HOM05D004149 ORTHO05D005028 3.1e-74 282.3 215 63.3
CAN.G740.4 Capsicum annuum HOM05D004149 ORTHO05D005028 4.1e-74 282.0 219 65.8
CARHR272500 Cardamine hirsuta HOM05D004149 ORTHO05D005028 4.1e-74 282.0 219 63.9
Sabra16G0113700 Salix brachista HOM05D004149 ORTHO05D005028 5.3e-74 281.6 230 63.9
Hma1.2p1_0479F.1_g161390 Hydrangea macrophylla HOM05D004149 ORTHO05D005028 6.9e-74 281.2 220 62.7
Prupe.6G279000 Prunus persica HOM05D004149 ORTHO05D005028 6.9e-74 281.2 226 62.8
Ciclev10029239m.g Citrus clementina HOM05D004149 ORTHO05D005028 1.2e-73 280.4 217 65.4
DCAR_018696 Daucus carota HOM05D004149 ORTHO05D005028 2.6e-73 279.3 224 64.7
BraA10t43671Z Brassica rapa HOM05D004149 ORTHO05D005028 5.9e-73 278.1 223 63.2
A10p15620 Brassica napus HOM05D004149 ORTHO05D005028 7.7e-73 277.7 223 63.2
Sp6g20340 Schrenkiella parvula HOM05D004149 ORTHO05D005028 1.0e-72 277.3 223 61.9
EL10Ac5g12549 Beta vulgaris HOM05D004149 ORTHO05D005028 1.3e-72 276.9 220 62.7
BolC3t13864H Brassica oleracea HOM05D004149 ORTHO05D005028 1.3e-72 276.9 223 61.0
BcaB01g04503 Brassica carinata HOM05D004149 ORTHO05D005028 1.7e-72 276.6 220 61.4
C03p14190 Brassica napus HOM05D004149 ORTHO05D005028 1.7e-72 276.6 223 61.9
Carub.0008s1926 Capsella rubella HOM05D004149 ORTHO05D005028 3.8e-72 275.4 225 60.0
Duzib168G0285 Durio zibethinus HOM05D004149 ORTHO05D005028 5.0e-72 275.0 220 64.1
C09p50720 Brassica napus HOM05D004149 ORTHO05D005028 4.2e-71 271.9 223 62.3
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 4.2e-71 271.9 218 62.4
Eucgr.B02246 Eucalyptus grandis HOM05D004149 ORTHO05D005028 4.2e-71 271.9 219 63.0
Manes.01G160400 Manihot esculenta HOM05D004149 ORTHO05D005028 4.2e-71 271.9 224 62.9
TAR633G0450 Trochodendron aralioides HOM05D004149 ORTHO05D005028 4.2e-71 271.9 217 61.8
Thhalv10014590m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 1.6e-70 270.0 223 61.0
AL8G34910 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 2.1e-70 269.6 215 62.8
A03p12090 Brassica napus HOM05D004149 ORTHO05D005028 2.7e-70 269.2 218 61.0
BraA03t10521Z Brassica rapa HOM05D004149 ORTHO05D005028 2.7e-70 269.2 218 61.0
Thhalv10010643m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 3.6e-70 268.9 211 63.0
AT5G58640 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 6.1e-70 268.1 215 63.7
AT3G47300 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 1.4e-69 266.9 208 64.9
ATR0681G135 Amborella trichopoda HOM05D004149 ORTHO05D005028 1.8e-69 266.5 217 61.8
Lj3A951T30 Lonicera japonica HOM05D004149 ORTHO05D005028 1.8e-69 266.5 250 57.2
ECA248G2679 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.0e-69 265.8 217 62.7
RcHm_v2.0_Chr3g0462841 Rosa chinensis HOM05D004149 ORTHO05D005028 3.0e-69 265.8 225 60.0
BolC9t57922H Brassica oleracea HOM05D004149 ORTHO05D005028 3.9e-69 265.4 229 60.7
MD03G1067200 Malus domestica HOM05D004149 ORTHO05D005028 5.2e-69 265.0 222 60.8
PGR102G2658 Punica granatum HOM05D004149 ORTHO05D005028 6.7e-69 264.6 216 61.1
Gohir.D09G089700 Gossypium hirsutum HOM05D004149 ORTHO05D005028 1.1e-68 263.8 217 61.3
Ah.12g058720 Amaranthus hybridus HOM05D004149 ORTHO05D005028 1.5e-68 263.5 221 59.7
TPR.G34577 Trifolium pratense HOM05D004149 ORTHO05D005028 1.5e-68 263.5 222 61.7
Aqoxy4G02534 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 2.0e-68 263.1 227 59.5
Gorai.006G105900 Gossypium raimondii HOM05D004149 ORTHO05D005028 3.3e-68 262.3 217 60.8
Thecc.09G299600 Theobroma cacao HOM05D004149 ORTHO05D005028 3.3e-68 262.3 216 62.5
Haze_24342 Corylus avellana HOM05D004149 ORTHO05D005028 7.4e-68 261.2 219 61.2
Gohir.A09G089600 Gossypium hirsutum HOM05D004149 ORTHO05D005028 9.7e-68 260.8 219 61.2
Psat2g057600 Pisum sativum HOM05D004149 ORTHO05D005028 9.7e-68 260.8 221 59.7
QL01p038648 Quercus lobata HOM05D004149 ORTHO05D005028 9.7e-68 260.8 223 60.1
FAN25G1984 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.3e-67 260.4 214 60.7
LjContig00155g0022980 Lotus japonicus HOM05D004149 ORTHO05D005028 1.3e-67 260.4 220 62.3
MD12G1168700 Malus domestica HOM05D004149 ORTHO05D005028 1.3e-67 260.4 219 60.3
Hund14286 Selenicereus undatus HOM05D004149 ORTHO05D005028 2.2e-67 259.6 224 60.7
Aa31LG4G16110 Aethionema arabicum HOM05D004149 ORTHO05D005028 2.8e-67 259.2 254 55.5
arahy.Tifrunner.gnm1.ann1.43A4DE Arachis hypogaea HOM05D004149 ORTHO05D005028 3.7e-67 258.8 219 59.8
Prupe.6G055700 Prunus persica HOM05D004149 ORTHO05D005028 3.7e-67 258.8 220 61.4
Lalb_Chr10g0103381 Lupinus albus HOM05D004149 ORTHO05D005028 4.8e-67 258.5 231 59.7
Potri.009G047000 Populus trichocarpa HOM05D004149 ORTHO05D005028 8.2e-67 257.7 219 60.7
Manes.09G107600 Manihot esculenta HOM05D004149 ORTHO05D005028 1.1e-66 257.3 202 65.3
Medtr5g071240 Medicago truncatula HOM05D004149 ORTHO05D005028 1.1e-66 257.3 222 60.8
FvH4_6g11300 Fragaria vesca HOM05D004149 ORTHO05D005028 1.8e-66 256.5 227 59.0
FAN14G0231 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.8e-66 256.5 227 59.0
FAN14G3883 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.8e-66 256.5 227 59.0
Lalb_Chr04g0252201 Lupinus albus HOM05D004149 ORTHO05D005028 1.8e-66 256.5 219 61.6
Potri.001G253000 Populus trichocarpa HOM05D004149 ORTHO05D005028 3.1e-66 255.8 227 58.1
FAN05G2859 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.1e-66 255.4 227 58.6
AL5G26480 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 7.0e-66 254.6 208 63.5
MD11G1071900 Malus domestica HOM05D004149 ORTHO05D005028 9.1e-66 254.2 224 58.0
CDE03G0191 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 1.6e-65 253.4 216 56.9
CDE04G2602 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 1.6e-65 253.4 213 58.2
FAN16G0525 Fragaria x ananassa HOM05D004149 ORTHO05D005028 2.0e-65 253.1 214 59.8
TWI31G0142 Tripterygium wilfordii HOM05D004149 ORTHO05D005028 2.0e-65 253.1 221 60.6
PSO339G1238 Papaver somniferum HOM05D004149 ORTHO05D005028 5.9e-65 251.5 226 58.8
arahy.Tifrunner.gnm1.ann1.AG3942 Arachis hypogaea HOM05D004149 ORTHO05D005028 7.7e-65 251.1 220 59.5
FvH4_3g38810 Fragaria vesca HOM05D004149 ORTHO05D005028 1.3e-64 250.4 214 58.9
HPP92_017934 Vanilla planifolia HOM05D004149 ORTHO05D005028 1.3e-64 250.4 241 57.3
PSO384G4313 Papaver somniferum HOM05D004149 ORTHO05D005028 5.0e-64 248.4 226 58.0
FAN09G2001 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.9e-63 246.5 227 57.7
Cpa.g.sc112.1 Carica papaya HOM05D004149 ORTHO05D005028 2.5e-63 246.1 167 71.3
Zm00001eb368380 Zea mays HOM05D004149 ORTHO05D005028 2.5e-63 246.1 221 54.3
RcHm_v2.0_Chr5g0070001 Rosa chinensis HOM05D004149 ORTHO05D005028 5.5e-63 245.0 222 56.8
Os01g0832200 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 7.2e-63 244.6 226 54.9
BcaC04g19825 Brassica carinata HOM05D004149 ORTHO05D005028 3.6e-62 242.3 212 59.0
Zm00001eb351750 Zea mays HOM05D004149 ORTHO05D005028 6.1e-62 241.5 245 51.0
Glyma.02G227600 Glycine max HOM05D004149 ORTHO05D005028 1.0e-61 240.7 233 56.7
Glyma.14G194500 Glycine max HOM05D004149 ORTHO05D005028 2.3e-61 239.6 239 55.2
Sp5g14550 Schrenkiella parvula HOM05D004149 ORTHO05D005028 3.0e-61 239.2 219 57.5
VMungo0647G1724 Vigna mungo HOM05D004149 ORTHO05D005028 3.0e-61 239.2 241 53.5
CANSAT54G2318 Cannabis sativa HOM05D004149 ORTHO05D005028 2.0e-60 236.5 252 50.8
Phvul.008G260400 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 2.0e-60 236.5 248 52.4
Atru.chr3.4194 Acer truncatum HOM05D004149 ORTHO05D005028 1.7e-59 233.4 157 72.0
Os05g0467300 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 3.7e-59 232.3 246 49.6
Sabra09G0034400 Salix brachista HOM05D004149 ORTHO05D005028 4.1e-58 228.8 265 48.7
Lj2C73G10 Lonicera japonica HOM05D004149 ORTHO05D005028 7.0e-58 228.0 273 49.5
SHI31752 Sapria himalayana HOM05D004149 ORTHO05D005028 1.6e-57 226.9 236 53.0
CiPaw.14G058300 Carya illinoinensis HOM05D004149 ORTHO05D005028 3.5e-57 225.7 201 59.7
Cfa011711 Carpinus fangiana HOM05D004149 ORTHO05D005028 3.8e-56 222.2 159 67.9
Dinv14507 Davidia involucrata HOM05D011585 ORTHO05D005028 5.0e-56 221.9 142 74.6
SEGI_37457 Sequoiadendron giganteum HOM05D004149 ORTHO05D005028 1.1e-55 220.7 214 55.6
Psat7g245800 Pisum sativum HOM05D004149 ORTHO05D005028 4.7e-54 215.3 123 82.9
AUR62030801 Chenopodium quinoa HOM05D004149 ORTHO05D005028 2.3e-53 213.0 230 52.2
Actinidia29092 Actinidia chinensis HOM05D004149 ORTHO05D005028 2.8e-51 206.1 174 60.3
Peaxi162Scf00170g00124 Petunia axillaris HOM05D004149 ORTHO05D005028 8.3e-51 204.5 136 71.3
AUR62030494 Chenopodium quinoa HOM05D004149 ORTHO05D005028 3.1e-50 202.6 136 69.1
Dinv03100 Davidia involucrata HOM05D004149 ORTHO05D005028 2.2e-48 196.4 129 72.9
FAN11G2604 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.2e-47 192.2 263 42.2
Ca_05615_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 5.2e-45 185.3 132 68.9
MBI15_g14842_MAGBIO Magnolia biondii HOM05D004149 ORTHO05D005028 8.8e-45 184.5 133 66.2
CSS0016200 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 1.1e-42 177.6 130 68.5
FAN21G1905 Fragaria x ananassa HOM05D004149 ORTHO05D005028 9.2e-42 174.5 124 65.3
Ciclev10013383m.g Citrus clementina HOM05D004149 ORTHO05D005028 3.5e-41 172.6 138 59.4
Carub.0005s1339 Capsella rubella HOM05D004149 ORTHO05D005028 1.5e-39 167.2 120 67.5
SMO358G0328 Selaginella moellendorffii HOM05D004149 ORTHO05D005028 3.6e-38 162.5 143 55.9
FAN02G4186 Fragaria x ananassa HOM05D004149 ORTHO05D005028 6.8e-37 158.3 235 43.4
vmacro20289 Vaccinium macrocarpon HOM05D004149 ORTHO05D005028 9.8e-36 154.5 133 63.2
Atru.chr8.2258 Acer truncatum HOM05D004149 ORTHO05D005028 5.0e-32 142.1 89 76.4
Solyc09g005590.3 Solanum lycopersicum HOM05D004149 ORTHO05D005028 2.8e-30 136.3 88 71.6
MD03G1067500 Malus domestica HOM05D004149 ORTHO05D005028 2.3e-21 106.7 71 76.1
Solyc09g005580.4 Solanum lycopersicum HOM05D004149 ORTHO05D005028 4.4e-20 102.4 96 54.2
MD04G1155500 Malus domestica HOM05D004149 ORTHO05D005028 2.9e-19 99.8 116 50.0
Aqoxy2G00865 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 3.7e-19 99.4 168 35.1
Sed0020125 Sechium edule HOM05D004149 ORTHO05D005028 4.9e-19 99.0 222 31.1
Cre14.g616950 Chlamydomonas reinhardtii HOM05D004149 ORTHO05D005028 1.0e-16 91.3 123 38.2
C07p23840 Brassica napus HOM05D004149 ORTHO05D005028 3.0e-16 89.7 77 57.1
GSVIVG01000345001 Vitis vinifera HOM05D000200 ORTHO05D011629 1.5e-15 87.4 92 53.3
PRCOL_00001680 Prasinoderma coloniale HOM05D004149 ORTHO05D005028 5.6e-15 85.5 115 38.3
GSVIVG01032328001 Vitis vinifera HOM05D004149 ORTHO05D005028 4.7e-14 82.4 86 52.3
GSVIVG01030787001 Vitis vinifera HOM05D004149 ORTHO05D005028 1.1e-13 81.3 94 47.9
MSTRG.19005 Avicennia marina HOM05D004149 ORTHO05D005028 1.2e-12 77.8 89 56.2
CBR_g34707 Chara braunii HOM05D004149 ORTHO05D005028 2.6e-12 76.6 117 36.8
MCO12G475 Micromonas commoda HOM05D004149 ORTHO05D005028 3.4e-12 76.3 125 36.0
BcaB01g01543 Brassica carinata HOM05D004149 ORTHO05D039425 1.1e-10 71.2 77 49.4
BcaB06g29604 Brassica carinata HOM05D004149 ORTHO05D039425 7.3e-07 58.5 56 51.8


User provided reference genes

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