Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.7e-96 355.9 169 100.0
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 2.5e-87 325.5 167 91.0
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.4e-77 293.1 168 81.0
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 3.0e-77 292.0 169 82.8
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 3.3e-76 288.5 169 82.8
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-75 286.6 168 82.7
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 2.8e-75 285.4 168 81.5
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 3.1e-74 282.0 169 80.5
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 5.3e-74 281.2 169 78.1
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.2e-73 280.0 169 78.7
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 2.0e-73 279.3 163 81.6
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 4.5e-73 278.1 167 80.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 2.2e-72 275.8 164 79.9
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 8.5e-72 273.9 164 79.3
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.4e-71 273.1 169 76.9
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 5.5e-71 271.2 164 77.4
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.2e-70 270.0 171 74.9
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.1e-70 269.2 168 76.8
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.1e-70 269.2 164 78.7
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.0e-69 266.9 164 76.2
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.0e-69 265.4 164 76.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.0e-69 265.4 164 76.8
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 6.7e-69 264.2 162 75.3
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 8.8e-69 263.8 169 72.8
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.6e-68 262.3 166 77.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 2.6e-68 262.3 145 83.4
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 2.6e-68 262.3 169 71.6
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 3.3e-68 261.9 163 76.7
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 4.4e-68 261.5 161 77.0
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.4e-68 261.5 166 74.1
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 5.7e-68 261.2 169 71.6
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 9.7e-68 260.4 165 75.8
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.3e-67 260.0 167 73.1
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 2.8e-67 258.8 164 74.4
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 4.8e-67 258.1 164 74.4
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 6.3e-67 257.7 167 72.5
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.3e-67 257.7 167 72.5
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.8e-66 256.1 162 74.7
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.4e-66 255.8 166 71.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 3.1e-66 255.4 164 75.0
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 4.1e-66 255.0 162 74.7
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 4.1e-66 255.0 168 72.0
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 5.3e-66 254.6 165 72.7
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 7.0e-66 254.2 164 75.0
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 7.0e-66 254.2 169 69.8
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.2e-65 253.4 162 73.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.5e-65 253.1 168 70.8
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 2.0e-65 252.7 163 73.6
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.5e-65 251.9 164 73.2
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 4.5e-65 251.5 167 71.9
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 4.5e-65 251.5 163 71.2
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.3e-64 250.0 165 73.9
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.2e-64 249.2 167 70.1
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 5.0e-64 248.1 164 71.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 5.0e-64 248.1 164 71.3
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.4e-63 246.5 166 71.1
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.5e-63 245.7 163 72.4
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.2e-63 245.4 164 70.1
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 8.0e-62 240.7 166 69.3
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 3.0e-61 238.8 165 69.1
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 8.8e-61 237.3 165 65.5
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 8.8e-61 237.3 167 67.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.5e-60 236.5 161 69.6
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.3e-60 235.3 165 65.5
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.7e-59 233.0 162 67.9
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 2.2e-59 232.6 162 67.3
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.2e-59 232.6 164 68.9
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 3.7e-59 231.9 157 69.4
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.7e-59 231.9 162 66.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.8e-59 231.5 157 68.2
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 4.8e-59 231.5 162 66.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 6.3e-59 231.1 164 67.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.4e-58 229.9 165 63.6
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.4e-58 229.9 165 64.8
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.8e-58 229.6 165 64.8
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 3.1e-58 228.8 159 67.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.1e-58 228.4 167 66.5
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 2.0e-57 226.1 164 65.9
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 3.5e-57 225.3 164 65.2
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.5e-57 225.3 163 67.5
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 4.5e-57 224.9 155 68.4
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 5.9e-57 224.6 164 65.9
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.2e-56 222.6 142 71.1
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.5e-55 219.9 165 64.2
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 3.2e-55 218.8 168 64.3
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 7.2e-55 217.6 165 63.6
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 9.4e-55 217.2 137 71.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 2.3e-53 212.6 137 70.8
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.1e-50 203.8 151 66.2
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.6e-49 199.9 165 62.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.6e-49 199.9 163 60.7
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.5e-49 198.4 161 59.6
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 7.7e-49 197.6 165 59.4
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 6.5e-48 194.5 165 60.6
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 8.5e-48 194.1 133 67.7
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.2e-47 192.2 158 60.8
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.2e-47 192.2 161 57.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 4.2e-47 191.8 166 61.4
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 9.4e-47 190.7 165 61.2
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.5e-44 183.3 159 53.5
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.6e-44 182.6 128 71.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.9e-41 171.4 112 72.3
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.3e-40 170.2 168 53.6
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.7e-40 169.9 163 49.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 3.8e-40 168.7 164 49.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 2.5e-39 166.0 172 52.9
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.6e-36 156.0 163 48.5
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.2e-35 152.9 170 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.8e-35 152.5 144 51.4
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.1e-34 150.6 154 53.2
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.1e-29 132.5 163 46.6
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.1e-29 132.5 157 45.9
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 7.5e-28 127.9 130 53.8
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.1e-26 124.0 88 72.7
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.4e-26 123.6 84 72.6
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 4.1e-26 122.1 109 56.9
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 4.6e-17 92.0 93 47.3
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 4.6e-17 92.0 146 39.0
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.7e-11 72.4 118 40.7
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.3e-08 63.2 45 64.4


User provided reference genes

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