Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 7.5e-149 530.8 329 100.0
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 1.1e-99 367.5 286 76.6
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 2.8e-79 299.7 296 74.0
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 2.6e-69 266.5 289 63.7
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 5.5e-67 258.8 268 68.3
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.2e-66 257.7 269 63.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 4.8e-63 245.7 263 64.3
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 1.4e-62 244.2 287 62.4
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 3.8e-60 236.1 289 61.2
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 5.5e-59 232.3 291 60.5
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 3.0e-57 226.5 302 57.9
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 3.9e-57 226.1 260 64.2
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 5.0e-52 209.1 258 57.4
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 1.5e-51 207.6 255 58.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 1.2e-50 204.5 255 57.6
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.6e-50 204.1 298 48.0
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 5.2e-49 199.1 289 49.8
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.2e-48 198.0 274 50.0
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 5.7e-48 195.7 261 57.5
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 2.8e-47 193.4 290 58.3
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 4.8e-47 192.6 313 49.2
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 3.1e-46 189.9 306 49.7
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 3.5e-45 186.4 302 45.7
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 6.5e-44 182.2 295 50.8
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.5e-43 181.0 295 45.1
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 1.5e-43 181.0 282 51.8
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 2.5e-43 180.3 268 52.6
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.6e-42 177.6 266 55.6
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 1.6e-42 177.6 296 47.0
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.7e-42 176.8 274 53.3
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 1.8e-41 174.1 274 44.5
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.8e-41 174.1 338 38.5
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 4.0e-41 172.9 266 53.0
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 6.8e-41 172.2 312 39.1
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.0e-40 170.6 305 53.1
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 2.0e-40 170.6 282 43.3
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.6e-40 170.2 274 54.0
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 5.7e-40 169.1 263 49.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.7e-39 167.5 296 48.0
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 2.2e-39 167.2 264 45.1
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 6.3e-39 165.6 283 53.0
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.1e-38 164.9 293 47.4
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.1e-38 164.9 158 58.9
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.1e-38 164.9 291 47.4
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.4e-38 163.7 169 55.0
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 3.1e-38 163.3 249 56.6
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.1e-38 162.9 271 53.5
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 9.1e-38 161.8 297 48.5
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 5.9e-37 159.1 267 45.3
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.0e-36 158.3 262 54.6
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 1.7e-36 157.5 292 50.3
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 2.9e-36 156.8 288 45.1
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 6.6e-36 155.6 291 37.5
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 8.6e-36 155.2 311 43.1
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.1e-35 154.8 301 47.5
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 4.2e-35 152.9 294 41.2
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.5e-35 152.5 332 43.7
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 2.1e-34 150.6 298 46.3
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.8e-34 150.2 366 42.1
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 3.6e-34 149.8 297 41.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.4e-33 147.9 295 46.4
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 1.8e-33 147.5 258 48.4
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 5.2e-33 146.0 259 42.1
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.2e-32 144.8 308 37.3
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 1.5e-32 144.4 142 52.1
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.0e-32 144.1 190 46.3
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 4.4e-32 142.9 182 46.2
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 4.9e-31 139.4 286 43.4
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 4.9e-31 139.4 274 39.4
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 6.3e-31 139.0 259 35.5
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 8.3e-31 138.7 270 37.0
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.4e-30 137.9 257 45.9
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.8e-30 137.5 287 42.9
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 3.1e-30 136.7 271 45.4
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.7e-29 133.7 291 40.2
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 7.8e-29 132.1 274 41.2
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 1.0e-28 131.7 259 47.9
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 1.0e-28 131.7 319 32.6
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 1.3e-28 131.3 295 40.3
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 6.6e-28 129.0 308 39.3
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 1.1e-27 128.3 258 40.3
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.9e-27 127.5 285 46.3
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 4.3e-27 126.3 273 39.2
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 5.6e-27 125.9 173 43.9
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 1.2e-26 124.8 318 32.4
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.1e-26 124.0 310 31.9
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 2.8e-26 123.6 302 39.4
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 6.1e-26 122.5 292 44.2
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 1.8e-25 120.9 292 43.2
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 1.8e-25 120.9 292 43.2
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.3e-25 120.6 276 44.6
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 3.1e-25 120.2 317 40.4
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 8.9e-25 118.6 281 33.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 9.8e-24 115.2 267 32.6
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.9e-23 112.8 75 68.0
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 1.4e-22 111.3 292 44.2
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.4e-22 111.3 292 44.9
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 2.0e-21 107.5 237 49.4
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 6.6e-20 102.4 162 40.7
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 6.2e-18 95.9 58 69.0
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 6.8e-17 92.4 171 38.6
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 2.0e-16 90.9 297 27.6
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.2e-13 81.6 58 60.3
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 3.9e-12 76.6 169 32.0
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 6.6e-12 75.9 145 31.7
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 1.2e-08 65.1 172 30.2
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 8.3e-07 58.9 63 46.0


User provided reference genes

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