Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G071832 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 0.0e+00 1101.7 579 100.0
Glyma.03G032900 Glycine max HOM05D006102 ORTHO05D007550 9.8e-253 876.7 551 84.0
Lj3g0012088 Lotus japonicus HOM05D006102 ORTHO05D007550 1.9e-208 729.6 557 71.8
Lalb_Chr07g0190291 Lupinus albus HOM05D006102 ORTHO05D007550 7.6e-197 691.0 556 69.1
arahy.Tifrunner.gnm1.ann1.W52PF9 Arachis hypogaea HOM05D006102 ORTHO05D007550 1.7e-188 663.3 562 64.9
TPR.G4985 Trifolium pratense HOM05D006102 ORTHO05D007550 1.4e-187 660.2 560 67.1
arahy.Tifrunner.gnm1.ann1.1V3LDQ Arachis hypogaea HOM05D006102 ORTHO05D007550 2.5e-187 659.4 560 64.6
Medtr4g027425 Medicago truncatula HOM05D006102 ORTHO05D007550 3.7e-175 619.0 591 60.2
Ca_19854_v3 Cicer arietinum L. HOM05D006102 ORTHO05D007550 8.5e-164 581.3 490 64.7
QL04p037175 Quercus lobata HOM05D006102 ORTHO05D007550 1.7e-151 540.4 552 52.5
RcHm_v2.0_Chr1g0349071 Rosa chinensis HOM05D006102 ORTHO05D007550 1.2e-146 524.2 546 52.6
Cfa011148 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.1e-142 511.1 516 53.1
Prupe.2G137200 Prunus persica HOM05D006102 ORTHO05D007550 1.4e-142 510.8 550 50.4
MD07G1115100 Malus domestica HOM05D006102 ORTHO05D007550 3.1e-142 509.6 556 52.2
Ciclev10018476m.g Citrus clementina HOM05D006102 ORTHO05D007550 2.7e-141 506.5 520 52.9
Duzib138G0330 Durio zibethinus HOM05D006102 ORTHO05D007550 5.0e-140 502.3 553 51.9
VMungo0331G1545 Vigna mungo HOM05D006102 ORTHO05D007550 3.3e-139 499.6 271 95.6
Potri.014G066000 Populus trichocarpa HOM05D006102 ORTHO05D007550 7.3e-139 498.4 548 52.6
FAN06G2296 Fragaria x ananassa HOM05D006102 ORTHO05D007550 6.1e-138 495.4 548 52.4
CANSAT56G2478 Cannabis sativa HOM05D006102 ORTHO05D007550 1.0e-137 494.6 550 50.5
FAN03G1880 Fragaria x ananassa HOM05D006102 ORTHO05D007550 6.8e-137 491.9 521 53.6
FAN06G2175 Fragaria x ananassa HOM05D006102 ORTHO05D007550 1.2e-136 491.1 548 52.2
Sabra14G0046000 Salix brachista HOM05D006102 ORTHO05D007550 2.2e-135 486.9 557 50.4
FAN10G3138 Fragaria x ananassa HOM05D006102 ORTHO05D007550 2.9e-135 486.5 547 49.9
FAN10G3898 Fragaria x ananassa HOM05D006102 ORTHO05D007550 6.4e-135 485.3 521 51.4
TAR375G0254 Trochodendron aralioides HOM05D006102 ORTHO05D007550 1.4e-134 484.2 552 46.9
CSS0002341 Camellia sinensis var. sinensis HOM05D006102 ORTHO05D007550 2.3e-132 476.9 551 49.7
Gohir.D11G083100 Gossypium hirsutum HOM05D006102 ORTHO05D007550 1.2e-130 471.1 554 50.5
Thecc.01G384200 Theobroma cacao HOM05D006102 ORTHO05D007550 1.6e-130 470.7 553 49.9
Gorai.007G088700 Gossypium raimondii HOM05D006102 ORTHO05D007550 1.4e-129 467.6 554 50.2
VMungo0331G0964 Vigna mungo HOM05D006102 ORTHO05D007550 4.0e-129 466.1 274 87.2
Dinv43669 Davidia involucrata HOM05D006102 ORTHO05D007550 8.9e-129 464.9 552 47.1
TWI59G0915 Tripterygium wilfordii HOM05D006102 ORTHO05D007550 2.0e-125 453.8 550 48.0
CsaV3_3G007350 Cucumis sativus L. HOM05D006102 ORTHO05D007550 1.9e-123 447.2 527 46.9
CiPaw.14G025500 Carya illinoinensis HOM05D006102 ORTHO05D007550 2.6e-120 436.8 483 49.3
vmacro13446 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 1.3e-119 434.5 561 44.6
Gohir.A11G078500 Gossypium hirsutum HOM05D006102 ORTHO05D007550 4.1e-118 429.5 554 47.8
THA.LOC104801481 Tarenaya hassleriana HOM05D006102 ORTHO05D007550 3.6e-114 416.4 520 46.2
Nn1g00999 Nelumbo nucifera HOM05D006102 ORTHO05D007550 1.1e-113 414.8 523 44.4
CARHR248110 Cardamine hirsuta HOM05D006102 ORTHO05D007550 3.4e-112 409.8 544 44.1
AT4G00060 Arabidopsis thaliana HOM05D006102 ORTHO05D007550 4.4e-112 409.5 549 44.3
PGR004G2833 Punica granatum HOM05D006102 ORTHO05D007550 3.7e-111 406.4 570 45.6
Sopen01g036600 Solanum pennellii HOM05D006102 ORTHO05D007550 6.4e-111 405.6 475 49.3
COL.COLO4_12485 Corchorus olitorius HOM05D006102 ORTHO05D007550 8.4e-111 405.2 548 44.5
Peaxi162Scf00803g00223 Petunia axillaris HOM05D006102 ORTHO05D007550 1.1e-110 404.8 557 46.3
Carub.0006s3716 Capsella rubella HOM05D006102 ORTHO05D007550 1.4e-110 404.4 549 44.8
CAN.G1872.3 Capsicum annuum HOM05D006102 ORTHO05D007550 3.5e-109 399.8 554 44.9
Sp6g00130 Schrenkiella parvula HOM05D006102 ORTHO05D007550 2.3e-108 397.1 546 44.9
SGA_v2.0_scaffold11G05526 Striga asiatica HOM05D006102 ORTHO05D007550 8.6e-108 395.2 531 45.2
AL6G53450 Arabidopsis lyrata HOM05D006102 ORTHO05D007550 2.5e-107 393.7 543 43.5
Aqoxy7G00755 Aquilegia oxysepala HOM05D006102 ORTHO05D007550 3.3e-107 393.3 543 43.6
Cfa011150 Carpinus fangiana HOM05D006102 ORTHO05D007550 9.6e-107 391.7 546 46.0
Thhalv10028362m.g Eutrema salsugineum HOM05D006102 ORTHO05D007550 1.6e-106 391.0 550 44.9
DCAR_015878 Daucus carota HOM05D006102 ORTHO05D007550 2.1e-106 390.6 552 42.4
Aa31LG5G130 Aethionema arabicum HOM05D006102 ORTHO05D007550 4.0e-105 386.3 407 49.4
BcaB01g02181 Brassica carinata HOM05D006102 ORTHO05D007550 7.6e-104 382.1 546 44.3
Sed0013724 Sechium edule HOM05D006102 ORTHO05D007550 9.9e-104 381.7 516 44.0
BcaC01g04890 Brassica carinata HOM05D006102 ORTHO05D007550 1.3e-103 381.3 547 43.7
C03p32590 Brassica napus HOM05D006102 ORTHO05D007550 1.3e-103 381.3 547 43.7
Migut.N01612 Erythranthe guttata HOM05D006102 ORTHO05D007550 1.7e-103 380.9 529 43.7
Nitab4.5_0000859g0180 Nicotiana tabacum HOM05D006102 ORTHO05D007550 1.7e-103 380.9 513 44.6
Nitab4.5_0011151g0030 Nicotiana tabacum HOM05D006102 ORTHO05D007550 1.7e-103 380.9 529 45.6
BolC3t15598H Brassica oleracea HOM05D006102 ORTHO05D007550 2.2e-103 380.6 547 43.9
Solyc01g090860.3 Solanum lycopersicum HOM05D006102 ORTHO05D007550 3.8e-103 379.8 551 43.9
Oeu032185.2 Olea europaea HOM05D006102 ORTHO05D007550 6.4e-103 379.0 554 44.8
A03p27130 Brassica napus HOM05D006102 ORTHO05D007550 1.4e-102 377.9 548 44.2
BraA03t11926Z Brassica rapa HOM05D006102 ORTHO05D007550 2.4e-102 377.1 548 44.2
Sc02g0002820 Simmondsia chinensis HOM05D006102 ORTHO05D007550 2.4e-102 377.1 552 42.9
Lj7A537G47 Lonicera japonica HOM05D006102 ORTHO05D007550 1.2e-101 374.8 494 42.7
Eucgr.D02494 Eucalyptus grandis HOM05D006102 ORTHO05D007550 1.3e-100 371.3 421 49.2
Lsat_1_v5_gn_3_129280 Lactuca sativa HOM05D006102 ORTHO05D007550 2.3e-100 370.5 533 45.4
Rhsim07G0031600 Rhododendron simsii HOM05D006102 ORTHO05D007550 4.0e-97 359.8 507 42.8
Atru.chr5.236 Acer truncatum HOM05D006102 ORTHO05D007550 3.5e-93 346.7 272 65.8
MSTRG.28175 Avicennia marina HOM05D006102 ORTHO05D007550 3.3e-91 340.1 461 45.6
Hund27378 Selenicereus undatus HOM05D006102 ORTHO05D007550 1.3e-90 338.2 565 41.2
Cfa011155 Carpinus fangiana HOM05D006102 ORTHO05D007550 2.8e-90 337.0 585 40.0
AUR62013660 Chenopodium quinoa HOM05D006102 ORTHO05D007550 2.4e-89 334.0 457 43.1
EL10Ac1g00837 Beta vulgaris HOM05D006102 ORTHO05D007550 6.9e-89 332.4 461 43.6
HanXRQChr03g0093281 Helianthus annuus HOM05D006102 ORTHO05D007550 1.2e-88 331.6 533 43.0
PSO017G2680 Papaver somniferum HOM05D006102 ORTHO05D007550 1.7e-87 327.8 457 45.1
Cpa.g.sc49.147 Carica papaya HOM05D006102 ORTHO05D007550 1.0e-84 318.5 273 57.1
GSVIVG01018154001 Vitis vinifera HOM05D006102 ORTHO05D007550 1.0e-84 318.5 362 47.8
PSO170G5751 Papaver somniferum HOM05D006102 ORTHO05D007550 6.7e-84 315.8 457 43.8
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 4.0e-81 306.6 510 39.6
unitig_748.g7113 Utricularia gibba HOM05D006102 ORTHO05D007550 4.0e-81 306.6 554 39.0
Ah.05g173810 Amaranthus hybridus HOM05D006102 ORTHO05D007550 6.9e-81 305.8 461 44.3
Psat0s3685g0040 Pisum sativum HOM05D006102 ORTHO05D007550 4.9e-79 299.7 289 60.6
AUR62004162 Chenopodium quinoa HOM05D006102 ORTHO05D007550 6.5e-79 299.3 398 43.5
Cfa011153 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.9e-75 287.7 467 39.4
ATR0317G095 Amborella trichopoda HOM05D006102 ORTHO05D007550 3.3e-67 260.4 593 32.4
Haze_02708 Corylus avellana HOM05D006102 ORTHO05D007550 7.4e-67 259.2 404 39.1
Hma1.2p1_0072F.1_g038360 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 5.9e-64 249.6 302 44.7
PGSC0003DMG401026018 Solanum tuberosum HOM05D006102 ORTHO05D007550 5.0e-63 246.5 207 58.5
SEGI_10795 Sequoiadendron giganteum HOM05D006102 ORTHO05D007550 1.8e-57 228.0 406 36.5
Cc02_g24460 Coffea canephora HOM05D006102 ORTHO05D007550 7.7e-56 222.6 371 38.3
FvH4_7g11041 Fragaria vesca HOM05D006102 ORTHO05D007550 3.8e-39 167.2 258 41.1
Manes.05G049400 Manihot esculenta HOM05D006102 ORTHO05D007550 9.4e-38 162.5 261 41.4
Mapoly0072s0019 Marchantia polymorpha HOM05D006102 ORTHO05D007550 2.3e-36 157.9 625 26.2
Haze_02710 Corylus avellana HOM05D006102 ORTHO05D007550 5.7e-35 153.3 211 47.4
HPP92_005330 Vanilla planifolia HOM05D006102 ORTHO05D007550 4.8e-34 150.2 382 32.2
MELO3C005957.2 Cucumis melo HOM05D006102 ORTHO05D007550 2.3e-28 131.3 235 36.6
Actinidia12183 Actinidia chinensis HOM05D006102 ORTHO05D007550 1.5e-27 128.6 241 35.3
ClCG05G000200 Citrullus lanatus HOM05D006102 ORTHO05D007550 5.7e-27 126.7 237 35.9
Hma1.2p1_0072F.1_g038370 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 6.3e-26 123.2 262 34.7
Oeu005825.4 Olea europaea HOM05D006102 ORTHO05D007550 7.3e-22 109.8 258 34.1
Pp3c16_11310 Physcomitrium patens HOM05D006102 ORTHO05D007550 3.4e-19 100.9 407 26.0


User provided reference genes

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