Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.0e-96 356.7 178 100.0
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 1.8e-72 276.2 174 81.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 2.6e-71 272.3 174 81.6
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 3.1e-64 248.8 178 70.2
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 1.5e-63 246.5 178 70.8
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 3.0e-59 232.3 176 68.8
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 3.9e-59 231.9 177 68.4
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.9e-58 229.6 174 65.5
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.5e-58 229.2 178 67.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.5e-58 229.2 161 71.4
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 8.1e-57 224.2 184 65.8
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.8e-56 223.0 149 73.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.8e-56 223.0 130 81.5
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.0e-56 221.9 133 78.9
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.2e-55 220.3 171 64.9
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.2e-55 220.3 176 64.8
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.5e-55 219.9 180 66.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.5e-55 219.9 171 65.5
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.6e-55 219.2 133 78.2
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.6e-55 219.2 182 61.5
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 3.4e-55 218.8 132 78.0
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 5.8e-55 218.0 174 62.6
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.3e-54 216.9 133 74.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.9e-54 215.7 132 75.8
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.9e-54 215.7 132 75.8
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.8e-54 215.3 132 75.8
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 4.9e-54 214.9 124 82.3
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 6.4e-54 214.5 137 74.5
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 8.4e-54 214.2 133 77.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.1e-53 213.8 187 64.2
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.1e-53 213.8 128 78.9
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.9e-53 213.0 132 75.0
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.9e-53 213.0 132 76.5
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 3.2e-53 212.2 129 78.3
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 4.2e-53 211.8 129 78.3
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 5.4e-53 211.5 145 71.0
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.4e-53 211.5 133 77.4
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.1e-53 211.1 132 74.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 9.3e-53 210.7 138 74.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.6e-52 209.9 131 77.1
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.1e-52 209.5 123 81.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.1e-52 209.5 161 65.2
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 3.5e-52 208.8 124 79.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.5e-52 208.8 131 76.3
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 3.5e-52 208.8 131 76.3
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 4.6e-52 208.4 131 76.3
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 6.0e-52 208.0 133 75.2
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 7.9e-52 207.6 133 76.7
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.0e-51 207.2 130 76.2
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 1.0e-51 207.2 150 68.7
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.3e-51 206.8 130 75.4
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.3e-51 206.8 126 78.6
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.8e-51 206.5 154 68.8
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 2.3e-51 206.1 130 75.4
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.3e-51 206.1 130 78.5
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 3.0e-51 205.7 153 68.6
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 3.0e-51 205.7 124 75.0
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 8.7e-51 204.1 123 76.4
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.1e-50 203.8 125 78.4
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.1e-50 203.8 130 76.2
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.1e-50 203.8 127 79.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.5e-50 202.6 123 80.5
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 3.3e-50 202.2 170 60.0
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 3.3e-50 202.2 125 76.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 4.3e-50 201.8 125 75.2
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 5.6e-50 201.4 128 73.4
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 5.6e-50 201.4 128 73.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 5.6e-50 201.4 123 76.4
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 7.4e-50 201.1 128 74.2
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 7.4e-50 201.1 128 73.4
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 9.6e-50 200.7 128 74.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.3e-49 200.3 123 76.4
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.6e-49 199.9 155 65.8
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.6e-49 199.9 125 76.0
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.1e-49 199.5 128 73.4
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 3.7e-49 198.7 128 73.4
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 3.7e-49 198.7 130 73.8
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 4.8e-49 198.4 126 72.2
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 4.8e-49 198.4 127 74.0
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.1e-48 197.2 121 77.7
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.4e-48 196.8 126 73.0
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 4.0e-48 195.3 128 72.7
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.2e-47 193.7 124 71.0
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 3.8e-46 188.7 125 75.2
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.6e-44 183.3 167 58.1
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.7e-44 182.6 124 72.6
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.3e-43 180.3 124 71.8
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.7e-43 177.9 108 79.6
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.7e-43 177.6 108 79.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.9e-42 176.4 126 65.9
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.1e-40 170.6 110 73.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.8e-40 169.9 148 60.8
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.1e-40 169.1 132 65.2
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 6.9e-40 167.9 128 66.4
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.7e-38 163.3 126 68.3
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.2e-38 162.9 109 76.1
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 5.5e-37 158.3 101 75.2
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.1e-37 157.9 132 62.9
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 7.9e-36 154.5 130 63.8
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 8.7e-35 151.0 106 68.9
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 6.9e-32 141.4 83 83.1
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.1e-28 128.3 81 75.3
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 3.3e-26 122.5 110 55.5
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 5.7e-26 121.7 125 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.3e-25 120.6 129 48.8
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 8.2e-25 117.9 128 49.2
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.4e-21 107.1 60 85.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.2e-21 105.9 60 85.0
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 9.4e-21 104.4 121 45.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 1.2e-20 104.0 68 73.5
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 4.8e-17 92.0 128 42.2
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.8e-16 90.1 84 54.8
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.2e-15 87.4 127 44.1
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 4.5e-15 85.5 87 54.0
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 5.9e-15 85.1 66 57.6
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.1e-13 80.9 58 63.8
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.7e-10 68.6 100 42.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.3e-09 67.4 48 62.5
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 2.4e-08 63.2 43 67.4


User provided reference genes

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