Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 8.4e-261 903.3 496 100.0
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 3.3e-180 635.6 497 75.5
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 8.6e-173 610.9 499 73.7
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 1.5e-105 387.5 529 50.9
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 2.5e-103 380.2 458 53.7
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 4.2e-103 379.4 541 48.6
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 6.7e-101 372.1 532 53.8
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 5.2e-93 345.9 483 52.0
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 1.1e-92 344.7 535 48.2
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 3.2e-87 326.6 489 49.1
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 3.6e-78 296.6 383 50.9
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 5.4e-74 282.7 563 42.8
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 3.8e-72 276.6 447 45.9
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 4.4e-68 263.1 438 42.7
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 3.6e-62 243.4 467 42.4
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 1.3e-59 235.0 578 36.7
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 9.2e-58 228.8 456 41.4
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 9.2e-58 228.8 446 42.4
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 1.0e-56 225.3 372 44.9
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 5.6e-55 219.5 451 40.6
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 7.3e-55 219.2 450 38.9
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 3.1e-53 213.8 502 39.2
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 4.0e-53 213.4 372 42.2
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 3.4e-52 210.3 382 42.1
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.1e-50 205.3 434 38.2
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 2.7e-49 200.7 534 37.1
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.7e-48 198.0 541 35.7
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 8.6e-48 195.7 534 35.2
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 2.5e-47 194.1 380 38.7
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 5.6e-47 193.0 540 34.4
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 9.5e-47 192.2 422 39.1
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.6e-46 190.3 494 34.2
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 6.4e-43 179.5 267 43.8
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 6.4e-43 179.5 259 44.0
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.7e-41 174.1 403 34.7
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.5e-41 173.7 480 35.4
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.5e-39 168.3 461 36.4
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.5e-39 168.3 480 35.0
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 3.6e-38 163.7 461 33.6
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.1e-37 162.2 481 32.2
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 6.8e-37 159.5 461 35.8
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 4.4e-36 156.8 428 33.2
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 1.4e-34 151.8 373 34.6
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.2e-33 148.7 431 37.1
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 2.1e-33 147.9 410 32.4
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 2.1e-33 147.9 464 33.4
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 5.1e-32 143.3 403 33.7
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 8.7e-32 142.5 408 34.1
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.5e-31 141.7 483 32.3
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 2.5e-31 141.0 329 34.3
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 2.8e-30 137.5 359 35.9
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 8.1e-30 136.0 394 32.5
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 7.6e-28 129.4 397 31.7
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 3.8e-27 127.1 270 37.4
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 1.1e-26 125.6 321 34.6
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 2.1e-25 121.3 319 33.5
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 2.1e-25 121.3 362 35.9
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 3.5e-25 120.6 383 35.0
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 4.6e-25 120.2 533 28.7
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 1.0e-24 119.0 327 33.9
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 1.7e-24 118.2 525 29.9
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 2.3e-24 117.9 516 33.9
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 1.1e-23 115.5 454 30.8
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 2.5e-23 114.4 288 34.4
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 4.3e-23 113.6 340 33.5
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 4.3e-23 113.6 352 34.1
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 5.6e-23 113.2 481 33.1
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 1.4e-21 108.6 332 33.1
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 2.4e-21 107.8 449 32.5
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 1.2e-20 105.5 327 30.6
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.7e-19 101.7 428 28.0
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 4.9e-19 100.1 323 30.3
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.1e-17 94.7 350 29.4
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 3.5e-17 94.0 334 31.4
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 3.5e-17 94.0 294 33.7
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 4.6e-17 93.6 250 31.2
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 4.6e-17 93.6 250 31.2
Glyma.03G033400 Glycine max HOM05D006954 ORTHO05D008729 7.9e-17 92.8 70 85.7
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 1.3e-16 92.0 286 31.1
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 1.8e-16 91.7 323 31.0
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.0e-16 90.9 328 32.0
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 8.7e-16 89.4 278 29.5
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 3.3e-15 87.4 331 29.9
Glyma.01G134500 Glycine max HOM05D006954 ORTHO05D008729 5.6e-15 86.7 78 57.7
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 5.6e-15 86.7 343 28.9
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 9.6e-15 85.9 365 31.2
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.6e-14 85.1 213 34.3
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 4.8e-14 83.6 251 28.7
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 1.1e-13 82.4 333 31.2
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 1.1e-13 82.4 273 27.8
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 9.0e-13 79.3 389 26.0
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.2e-12 79.0 331 31.4
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 3.4e-12 77.4 401 25.2
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 5.8e-12 76.6 207 30.9
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 1.7e-11 75.1 350 26.6
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 6.4e-11 73.2 323 26.3
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 1.4e-10 72.0 383 27.2
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.4e-10 72.0 333 27.6
Glyma.09G125400 Glycine max HOM05D001093 ORTHO05D000743 1.4e-10 72.0 153 35.9
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 1.9e-10 71.6 366 27.9
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.2e-10 70.9 366 27.9
Phvul.010G071700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 3.2e-10 70.9 207 32.9
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 4.2e-10 70.5 362 27.3
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 5.5e-10 70.1 333 27.3
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 7.1e-10 69.7 334 27.8
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 9.3e-10 69.3 337 27.9
Lj2g0025985 Lotus japonicus HOM05D001093 ORTHO05D008729 2.1e-09 68.2 154 35.1
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 2.1e-09 68.2 267 30.0
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 2.7e-09 67.8 397 29.0
Glyma.06G230000 Glycine max HOM05D001093 ORTHO05D000743 3.5e-09 67.4 135 38.5
HanXRQChr05g0157201 Helianthus annuus HOM05D005220 ORTHO05D006082 6.7e-08 63.2 221 27.6
TPR.G37844 Trifolium pratense HOM05D001093 ORTHO05D000743 2.5e-07 61.2 75 44.0
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 4.3e-07 60.5 179 33.0
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 7.4e-07 59.7 239 28.0
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.3e-06 58.9 237 24.9
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 2.8e-06 57.8 212 30.2
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 3.7e-06 57.4 198 26.8
Lj2g0007742 Lotus japonicus HOM05D001093 ORTHO05D000743 4.8e-06 57.0 154 31.8
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 4.8e-06 57.0 215 27.4
Psat1g092360 Pisum sativum HOM05D001093 ORTHO05D000743 6.2e-06 56.6 147 32.7
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 8.2e-06 56.2 213 26.8


User provided reference genes

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