Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G070111 Phaseolus vulgaris HOM05D006432 ORTHO05D008257 3.2e-81 305.1 159 100.0
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 7.5e-70 267.3 159 89.3
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 1.4e-63 246.5 159 84.3
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 1.7e-45 186.4 171 64.3
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 2.3e-42 176.0 165 64.8
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 4.3e-41 171.8 168 63.7
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 2.8e-40 169.1 178 61.2
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 1.4e-39 166.8 167 62.9
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 6.8e-39 164.5 171 60.8
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 8.9e-39 164.1 173 59.0
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 1.2e-38 163.7 175 60.6
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 4.4e-38 161.8 169 58.6
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 9.8e-38 160.6 167 59.9
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 1.3e-37 160.2 176 59.1
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 1.1e-36 157.1 177 57.1
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 1.4e-36 156.8 177 57.1
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 1.9e-36 156.4 123 71.5
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 1.9e-36 156.4 130 68.5
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 1.9e-36 156.4 147 61.2
FvH4_4g04000 Fragaria vesca HOM05D003789 ORTHO05D004158 7.1e-36 154.5 173 57.2
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 7.1e-36 154.5 177 59.3
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 7.1e-36 154.5 171 60.8
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 9.2e-36 154.1 110 76.4
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 1.2e-35 153.7 177 54.2
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 1.6e-35 153.3 99 79.8
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 3.5e-35 152.1 170 56.5
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 3.5e-35 152.1 127 68.5
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 3.5e-35 152.1 110 75.5
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 3.5e-35 152.1 174 57.5
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 6.0e-35 151.4 156 58.3
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 6.0e-35 151.4 169 56.8
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 7.8e-35 151.0 117 70.1
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 1.0e-34 150.6 96 80.2
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 1.0e-34 150.6 96 80.2
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 1.0e-34 150.6 171 52.6
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 1.3e-34 150.2 109 75.2
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 2.3e-34 149.4 156 59.6
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 3.0e-34 149.1 97 79.4
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 3.0e-34 149.1 109 72.5
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 3.9e-34 148.7 157 59.2
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 5.1e-34 148.3 141 65.2
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 5.1e-34 148.3 168 57.1
Cpa.g.sc44.33 Carica papaya HOM05D006432 ORTHO05D008257 6.6e-34 147.9 94 80.9
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 6.6e-34 147.9 176 52.8
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 8.6e-34 147.5 95 80.0
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 8.6e-34 147.5 95 80.0
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 8.6e-34 147.5 92 83.7
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 1.1e-33 147.1 176 52.8
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 1.9e-33 146.4 95 80.0
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 2.5e-33 146.0 152 59.2
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 2.5e-33 146.0 94 77.7
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 2.5e-33 146.0 160 54.4
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 4.3e-33 145.2 92 82.6
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 4.3e-33 145.2 141 61.7
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 5.6e-33 144.8 95 75.8
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 7.3e-33 144.4 85 88.2
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.2e-32 143.7 107 72.9
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 1.2e-32 143.7 95 74.7
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 1.2e-32 143.7 153 55.6
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 1.6e-32 143.3 142 59.2
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 2.8e-32 142.5 95 76.8
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 4.7e-32 141.7 91 76.9
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 4.7e-32 141.7 85 83.5
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 4.7e-32 141.7 101 73.3
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 6.2e-32 141.4 148 58.8
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 8.1e-32 141.0 128 66.4
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 1.1e-31 140.6 83 86.7
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 1.8e-31 139.8 137 60.6
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 1.8e-31 139.8 186 51.6
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 2.3e-31 139.4 83 85.5
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 3.1e-31 139.0 119 63.0
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 5.2e-31 138.3 83 84.3
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 5.2e-31 138.3 173 53.8
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 5.2e-31 138.3 121 64.5
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 5.2e-31 138.3 144 54.2
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 5.2e-31 138.3 157 53.5
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 6.8e-31 137.9 116 67.2
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 6.8e-31 137.9 106 70.8
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 6.8e-31 137.9 106 70.8
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 6.8e-31 137.9 145 58.6
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 6.8e-31 137.9 84 83.3
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 8.9e-31 137.5 173 54.3
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 2.0e-30 136.3 91 74.7
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 2.6e-30 136.0 91 74.7
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 5.8e-30 134.8 173 53.8
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 9.9e-30 134.0 159 54.1
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 9.9e-30 134.0 124 59.7
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 9.9e-30 134.0 122 63.1
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 1.3e-29 133.7 171 49.7
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 2.9e-29 132.5 162 53.1
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 3.7e-29 132.1 148 53.4
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 1.1e-28 130.6 154 51.9
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 1.1e-28 130.6 154 51.9
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 1.1e-28 130.6 154 53.9
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 1.9e-28 129.8 171 49.1
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 5.4e-28 128.3 153 52.9
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 7.1e-28 127.9 83 80.7
Nn1g02875 Nelumbo nucifera HOM05D006432 ORTHO05D008257 3.5e-27 125.6 82 80.5
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 1.5e-25 120.2 114 60.5
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 1.6e-24 116.7 93 64.5
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 3.4e-22 109.0 114 50.9
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 8.4e-21 104.4 92 55.4
BcaB05g22938 Brassica carinata HOM05D006432 ORTHO05D008257 4.6e-19 98.6 119 52.1
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 7.8e-19 97.8 138 44.9
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 1.3e-18 97.1 92 59.8
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 1.9e-17 93.2 63 77.8
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 2.1e-16 89.7 109 45.0
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 9.0e-15 84.3 91 50.5
Cre02.g143667 Chlamydomonas reinhardtii HOM05D006432 ORTHO05D008257 3.9e-10 68.9 116 37.9
CAN.G345.5 Capsicum annuum HOM05D006432 ORTHO05D008257 9.0e-07 57.8 43 69.8


User provided reference genes

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