Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 0.0e+00 1104.4 530 100.0
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.7e-302 1041.2 528 93.8
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.0e-284 981.9 528 87.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.1e-234 816.6 531 74.2
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.1e-229 798.1 516 74.8
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 4.6e-225 784.6 532 71.2
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 2.3e-224 782.3 528 71.4
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.5e-212 743.0 407 87.7
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.0e-208 730.3 513 68.0
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-208 729.9 518 68.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-208 729.9 518 68.1
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.3e-208 729.2 518 68.0
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.7e-208 727.6 519 68.2
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.1e-207 726.9 515 68.7
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.6e-207 725.7 494 69.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 5.7e-207 724.5 522 67.6
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.2e-206 722.6 516 67.6
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 6.3e-206 721.1 514 66.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.1e-205 718.8 530 66.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 7.0e-205 717.6 519 67.6
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.6e-204 715.7 518 66.0
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.6e-204 715.7 521 66.6
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.5e-204 715.3 518 66.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.7e-204 714.1 518 65.8
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.3e-203 713.4 516 65.3
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 3.8e-203 711.8 501 67.7
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.0e-203 711.4 517 66.2
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.1e-202 710.3 515 65.6
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 7.2e-202 707.6 501 67.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.6e-201 706.4 517 65.6
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.0e-200 703.7 513 66.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 3.0e-200 702.2 525 65.1
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 4.0e-200 701.8 514 66.9
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 6.7e-200 701.0 506 67.4
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 8.8e-200 700.7 518 64.1
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 2.0e-199 699.5 522 64.6
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.6e-199 699.1 517 65.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.7e-199 697.2 520 65.0
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.7e-198 696.4 531 63.1
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.8e-198 695.7 517 66.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 6.3e-198 694.5 518 64.7
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 3.1e-197 692.2 512 66.2
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 4.1e-197 691.8 509 64.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.3e-197 691.4 517 64.4
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 7.0e-197 691.0 498 66.5
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 9.1e-197 690.6 512 65.6
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.2e-196 690.3 518 64.3
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.0e-196 689.5 513 63.7
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.5e-196 688.7 528 62.1
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 5.9e-196 688.0 516 64.5
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.0e-195 687.2 524 62.4
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 1.0e-195 687.2 516 63.6
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.3e-195 686.8 518 63.1
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.3e-195 686.8 516 64.5
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.8e-195 685.3 515 62.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 6.5e-195 684.5 520 64.0
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 6.5e-195 684.5 513 64.1
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 3.2e-194 682.2 511 63.0
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 3.2e-194 682.2 508 62.4
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 5.5e-194 681.4 512 62.5
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 9.4e-194 680.6 490 66.1
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.6e-193 679.9 515 61.7
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.1e-193 679.5 517 63.6
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 4.7e-193 678.3 522 62.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 8.0e-193 677.6 512 61.5
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.8e-192 676.4 512 61.3
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 3.0e-192 675.6 508 61.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 4.0e-192 675.2 529 62.9
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 6.8e-192 674.5 515 61.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 6.8e-192 674.5 530 61.5
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 2.0e-191 672.9 512 62.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.6e-191 672.5 513 62.8
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 4.4e-191 671.8 501 64.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 9.8e-191 670.6 525 62.9
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.8e-190 669.1 512 60.5
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.8e-190 668.3 497 63.4
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.8e-190 668.3 497 63.4
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 6.3e-190 667.9 509 63.3
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 6.3e-190 667.9 498 64.1
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.4e-189 666.8 512 60.5
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.4e-189 666.8 512 60.5
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.4e-189 666.8 513 63.7
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 2.4e-189 666.0 531 61.6
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 5.4e-189 664.8 524 61.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 5.4e-189 664.8 526 61.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.2e-188 663.7 492 65.7
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 2.7e-188 662.5 552 59.4
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 3.5e-188 662.1 528 63.3
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.0e-187 658.3 586 55.8
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.9e-186 656.4 466 66.7
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 2.3e-184 649.4 521 60.7
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 7.5e-183 644.4 521 60.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.8e-176 623.2 497 60.4
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 5.9e-172 608.2 517 57.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 6.6e-171 604.7 528 58.0
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 2.9e-166 589.3 465 61.1
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 5.6e-162 575.1 366 73.8
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 3.1e-160 569.3 523 54.1
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 2.2e-158 563.1 358 73.2
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.7e-158 562.4 516 54.3
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 3.0e-155 552.7 343 73.2
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.3e-154 548.9 370 68.1
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 8.1e-129 464.9 261 80.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 7.9e-116 421.8 390 51.8
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 6.9e-112 408.7 427 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.5e-111 407.5 422 47.2
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 9.3e-109 398.3 392 48.7
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.8e-99 367.5 395 43.0
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.9e-70 270.4 168 70.2
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 8.3e-57 225.7 120 87.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 8.3e-49 199.1 167 55.1
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 1.3e-33 148.7 332 30.4
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 9.9e-26 122.5 122 46.7
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.2e-25 121.3 120 53.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.2e-16 90.5 98 41.8
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.4e-13 79.7 54 63.0
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 9.9e-10 69.3 73 41.1
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 6.4e-09 66.6 58 43.1
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.4e-08 64.7 73 35.6
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.4e-08 64.7 73 35.6
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.4e-08 64.7 73 35.6
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.0e-06 59.3 99 29.3


User provided reference genes

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