Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 1.3e-154 549.7 269 100.0
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 2.6e-131 472.2 271 87.5
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 4.7e-117 424.9 269 79.6
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 1.3e-114 416.8 269 78.8
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 6.0e-96 354.8 281 68.7
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 2.2e-74 283.1 263 61.6
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 4.6e-72 275.4 290 56.9
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 2.5e-70 269.6 294 57.1
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 2.8e-69 266.2 285 57.9
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 1.1e-65 254.2 278 55.4
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 4.2e-65 252.3 265 56.6
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 7.4e-62 241.5 278 55.0
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 3.4e-59 232.6 259 56.0
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 5.0e-58 228.8 258 53.9
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 5.2e-55 218.8 249 54.2
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 3.3e-54 216.1 305 48.2
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 2.6e-51 206.5 273 48.0
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 2.5e-49 199.9 262 50.4
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 4.7e-48 195.7 276 47.5
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 5.7e-46 188.7 285 42.5
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 2.2e-45 186.8 281 44.8
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 3.5e-43 179.5 262 47.3
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 1.3e-42 177.6 274 41.6
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 2.2e-42 176.8 280 40.4
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 1.1e-41 174.5 288 42.4
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 7.2e-41 171.8 266 44.0
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 1.2e-40 171.0 266 44.0
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.7e-40 169.9 265 44.2
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 6.1e-40 168.7 256 46.1
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 1.0e-39 167.9 228 50.9
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 1.4e-39 167.5 258 43.8
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 3.0e-39 166.4 283 40.3
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 3.0e-39 166.4 281 39.5
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 5.2e-39 165.6 268 40.3
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 3.4e-38 162.9 288 44.4
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 5.7e-38 162.2 269 45.0
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 1.6e-35 154.1 258 41.9
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 1.0e-34 151.4 274 43.4
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 1.7e-34 150.6 263 43.7
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 1.9e-33 147.1 285 36.8
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 2.5e-33 146.7 245 41.2
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 3.6e-32 142.9 272 38.6
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 2.6e-30 136.7 257 38.1
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 7.5e-30 135.2 260 39.6
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 1.3e-29 134.4 270 36.3
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 3.7e-29 132.9 272 37.5
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 1.1e-28 131.3 269 39.8
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 1.4e-28 131.0 272 37.5
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 1.4e-28 131.0 240 37.5
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 4.1e-28 129.4 259 35.9
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 1.2e-27 127.9 260 37.7
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 4.5e-27 125.9 270 36.3
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 3.3e-25 119.8 259 39.8
ECA247G1536 Erigeron canadensis HOM05D007653 ORTHO05D009670 4.3e-25 119.4 245 39.2
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 5.6e-25 119.0 290 34.1
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 1.4e-23 114.4 285 31.9
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 6.8e-23 112.1 276 34.8
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 1.5e-22 110.9 254 33.1
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 2.0e-22 110.5 256 32.4
AL5G32220 Arabidopsis lyrata HOM05D007653 ORTHO05D009670 9.8e-22 108.2 252 31.7
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 9.8e-22 108.2 257 31.5
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 6.4e-21 105.5 253 31.6
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 1.1e-20 104.8 253 31.2
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 1.1e-20 104.8 234 34.6
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 1.8e-20 104.0 255 31.8
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 1.8e-20 104.0 255 31.8
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 1.8e-20 104.0 255 31.8
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 3.2e-20 103.2 255 31.8
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 3.2e-20 103.2 255 31.8
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 7.0e-20 102.1 241 37.3
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 7.0e-20 102.1 274 32.1
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 9.2e-20 101.7 253 31.2
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 1.2e-19 101.3 266 35.7
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 1.6e-19 100.9 252 36.1
CAN.G588.49 Capsicum annuum HOM05D007653 ORTHO05D009670 2.7e-19 100.1 264 32.6
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 3.9e-18 96.3 268 33.2
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 2.8e-16 90.1 248 31.9
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 6.2e-16 89.0 298 31.5
FAN09G3847 Fragaria x ananassa HOM05D007653 ORTHO05D009670 6.2e-16 89.0 259 36.7
THA.LOC104806615 Tarenaya hassleriana HOM05D007653 ORTHO05D009670 8.0e-16 88.6 266 30.1
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 1.4e-15 87.8 236 33.1
Nitab4.5_0009553g0030 Nicotiana tabacum HOM05D007653 ORTHO05D009670 8.9e-15 85.1 246 32.1
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 1.2e-14 84.7 255 29.0
AUR62030786 Chenopodium quinoa HOM05D007653 ORTHO05D009670 2.0e-14 84.0 199 37.7
FAN02G3974 Fragaria x ananassa HOM05D007653 ORTHO05D009670 1.3e-13 81.3 122 51.6
Cc06_g00970 Coffea canephora HOM05D001108 ORTHO05D001619 8.3e-13 78.6 199 36.2
Nn7g37369 Nelumbo nucifera HOM05D007653 ORTHO05D009670 3.0e-10 70.1 267 27.7
Nn6g33585 Nelumbo nucifera HOM05D007653 ORTHO05D009670 1.2e-08 64.7 260 25.8
BcaC01g00085 Brassica carinata HOM05D002063 ORTHO05D002075 2.3e-07 60.5 208 32.2
C03p75610 Brassica napus HOM05D002063 ORTHO05D002075 2.3e-07 60.5 208 32.2
HPP92_021765 Vanilla planifolia HOM05D002063 ORTHO05D002075 4.0e-07 59.7 206 30.6
BolC3t19818H Brassica oleracea HOM05D002063 ORTHO05D002075 5.2e-07 59.3 208 30.8
MELO3C018721.2 Cucumis melo HOM05D002063 ORTHO05D002075 6.8e-07 58.9 199 29.6
A08p25230 Brassica napus HOM05D002063 ORTHO05D002075 4.4e-06 56.2 202 28.7
BraA08t34475Z Brassica rapa HOM05D002063 ORTHO05D002075 4.4e-06 56.2 202 29.2
CDE07G0185 Ceratophyllum demersum HOM05D003447 ORTHO05D003967 5.8e-06 55.8 88 38.6
COL.COLO4_31282 Corchorus olitorius HOM05D002063 ORTHO05D002075 5.8e-06 55.8 223 26.5
Carub.0001s2741 Capsella rubella HOM05D002063 ORTHO05D002075 7.5e-06 55.5 209 28.2
Nn1g06127 Nelumbo nucifera HOM05D007653 ORTHO05D009670 7.5e-06 55.5 175 28.0
Phvul.011G129400 Phaseolus vulgaris HOM05D002063 ORTHO05D002075 7.5e-06 55.5 218 24.3
Nn4g22427 Nelumbo nucifera HOM05D007653 ORTHO05D009670 9.9e-06 55.1 93 34.4


User provided reference genes

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