Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 4.5e-36 154.1 77 100.0
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 8.4e-35 149.8 77 96.1
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.0e-32 142.9 74 93.2
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.8e-30 134.8 75 84.0
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 4.8e-30 134.0 74 87.8
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.3e-29 130.6 74 82.4
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.3e-29 130.6 74 82.4
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 79.7
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 79.7
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 79.7
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 83.8
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 81.1
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 3.4e-28 127.9 75 78.7
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 4.5e-28 127.5 74 79.7
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 77.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 7.6e-28 126.7 75 80.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 7.6e-28 126.7 75 77.3
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 1.0e-27 126.3 75 76.0
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.7e-27 125.6 72 81.9
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.7e-27 125.6 74 79.7
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.7e-27 125.6 74 79.7
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.2e-27 125.2 74 77.0
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.2e-27 125.2 74 77.0
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 2.2e-27 125.2 75 77.3
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 2.2e-27 125.2 75 78.7
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.8e-27 124.4 74 78.4
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 4.9e-27 124.0 75 74.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 4.9e-27 124.0 72 79.2
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 4.9e-27 124.0 74 74.3
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 6.5e-27 123.6 74 79.7
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 8.4e-27 123.2 75 74.7
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 8.4e-27 123.2 74 75.7
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 8.4e-27 123.2 74 77.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 77.0
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 78.7
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 78.7
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 74.7
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 74.7
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.4e-26 122.5 75 77.3
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 1.4e-26 122.5 75 77.3
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 2.5e-26 121.7 75 74.7
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.2e-26 121.3 75 73.3
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 3.2e-26 121.3 75 76.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 3.2e-26 121.3 75 76.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 3.2e-26 121.3 75 76.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 3.2e-26 121.3 75 74.7
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 4.2e-26 120.9 75 76.0
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 4.2e-26 120.9 74 74.3
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 4.2e-26 120.9 75 77.3
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 9.3e-26 119.8 75 74.7
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 9.3e-26 119.8 75 74.7
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 9.3e-26 119.8 74 78.4
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 1.2e-25 119.4 75 70.7
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 1.2e-25 119.4 75 78.7
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 2.1e-25 118.6 75 74.7
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.7e-25 118.2 74 73.0
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 2.7e-25 118.2 73 72.6
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.5e-25 117.9 74 73.0
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 3.5e-25 117.9 73 72.6
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 3.5e-25 117.9 74 71.6
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 4.6e-25 117.5 74 73.0
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 6.0e-25 117.1 74 73.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 6.0e-25 117.1 75 70.7
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.0e-25 117.1 75 73.3
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.3e-24 115.9 75 73.3
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.8e-24 115.5 74 75.7
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 1.8e-24 115.5 73 69.9
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.3e-24 115.2 73 72.6
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 2.3e-24 115.2 74 74.3
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 3.0e-24 114.8 74 74.3
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 3.9e-24 114.4 74 74.3
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 3.9e-24 114.4 75 73.3
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 5.1e-24 114.0 75 73.3
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 5.1e-24 114.0 74 75.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 6.7e-24 113.6 74 75.7
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 6.7e-24 113.6 74 75.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 6.7e-24 113.6 75 72.0
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 8.7e-24 113.2 74 68.9
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 1.5e-23 112.5 74 74.3
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 73.3
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.5e-23 112.5 73 75.3
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 68.0
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 68.0
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 1.9e-23 112.1 74 73.0
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 2.5e-23 111.7 75 70.7
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 5.7e-23 110.5 73 74.0
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 5.7e-23 110.5 77 70.1
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 1.6e-22 109.0 75 69.3
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.6e-22 109.0 75 68.0
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 4.8e-22 107.5 66 78.8
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 8.2e-22 106.7 73 69.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 8.2e-22 106.7 73 69.9
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 8.2e-22 106.7 75 68.0
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.8e-21 105.5 67 73.1
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 2.4e-21 105.1 67 71.6
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 4.1e-21 104.4 75 64.0
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 6.9e-21 103.6 73 67.1
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 6.9e-21 103.6 104 53.8
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.2e-20 102.8 74 66.2
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 2.0e-20 102.1 73 67.1
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 2.0e-20 102.1 73 67.1
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 3.4e-20 101.3 73 68.5
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 1.7e-19 99.0 73 64.4
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 2.2e-19 98.6 72 63.9
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 2.9e-19 98.2 75 61.3
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 3.2e-18 94.7 66 66.7
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 5.5e-18 94.0 116 47.4
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 6.1e-17 90.5 68 55.9
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 1.3e-14 82.8 68 50.0
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 6.9e-13 77.0 57 63.2
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 3.8e-11 71.2 62 51.6
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 5.0e-11 70.9 47 70.2
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.5e-10 68.6 43 74.4
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 4.2e-10 67.8 44 75.0
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.2e-09 66.2 43 72.1
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.6e-09 65.9 46 67.4
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 7.9e-09 63.5 43 72.1
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 2.3e-08 62.0 63 44.4
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 5.1e-08 60.8 33 78.8
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.3e-06 56.2 41 63.4


User provided reference genes

Program Settings