Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 3.9e-122 441.4 215 100.0
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 5.0e-101 371.3 215 86.5
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 8.8e-82 307.4 213 75.1
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 3.3e-81 305.4 216 76.4
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 1.6e-75 286.6 194 77.8
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 8.0e-67 257.7 151 84.1
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 3.6e-51 205.7 222 56.3
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 3.7e-40 169.1 208 47.6
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.9e-39 166.8 206 48.1
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 4.7e-35 152.1 225 43.6
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 4.7e-35 152.1 225 43.6
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 6.2e-35 151.8 199 47.2
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.4e-34 150.6 199 46.7
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.5e-33 147.1 198 45.5
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 3.4e-33 146.0 199 48.2
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.7e-32 143.7 217 42.4
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 2.2e-32 143.3 221 41.6
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 2.2e-32 143.3 198 42.9
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 2.9e-32 142.9 199 46.2
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.9e-32 142.1 199 46.2
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 6.4e-32 141.7 199 44.2
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.1e-31 141.0 199 43.7
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 1.4e-31 140.6 199 43.2
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 9.2e-31 137.9 228 39.0
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 3.5e-30 136.0 221 43.0
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 6.0e-30 135.2 219 43.4
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.0e-29 134.4 216 43.5
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 3.0e-29 132.9 191 44.0
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 5.1e-29 132.1 199 43.7
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 6.6e-29 131.7 142 51.4
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 6.6e-29 131.7 214 42.5
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 8.6e-29 131.3 199 42.7
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 1.5e-28 130.6 202 41.1
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 3.3e-28 129.4 200 42.5
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 4.3e-28 129.0 143 49.7
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 7.3e-28 128.3 214 39.3
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 9.6e-28 127.9 215 39.1
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.6e-27 127.1 142 52.1
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 2.1e-27 126.7 206 42.2
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 2.8e-27 126.3 203 40.4
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.1e-26 124.4 226 39.4
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.1e-26 124.4 227 38.3
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.1e-26 124.4 199 40.7
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 1.4e-26 124.0 200 43.0
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.4e-26 124.0 195 41.5
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 1.8e-26 123.6 147 46.3
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 1.2e-25 120.9 223 39.9
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 2.0e-25 120.2 215 41.9
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.6e-25 119.8 201 43.3
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 3.4e-25 119.4 199 40.7
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 1.3e-24 117.5 229 38.9
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 2.2e-24 116.7 214 36.9
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.9e-24 116.3 201 43.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 3.2e-23 112.8 201 39.3
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 7.1e-23 111.7 204 40.2
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 1.6e-22 110.5 198 40.4
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 1.6e-22 110.5 217 38.7
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 1.6e-22 110.5 202 37.1
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 4.6e-22 109.0 202 40.6
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 7.8e-22 108.2 223 36.8
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 1.7e-21 107.1 204 39.7
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.7e-21 107.1 124 50.0
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 1.7e-21 107.1 212 36.8
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 2.3e-21 106.7 215 38.1
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 3.9e-21 105.9 201 38.3
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 3.9e-21 105.9 201 38.3
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 1.5e-20 104.0 197 37.6
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 1.9e-20 103.6 200 37.5
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 3.3e-20 102.8 206 36.9
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 5.6e-20 102.1 208 38.5
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 2.8e-19 99.8 173 37.0
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 4.8e-19 99.0 203 34.0
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 8.1e-19 98.2 205 36.6
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 2.4e-18 96.7 206 36.4
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 3.1e-18 96.3 223 33.2
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 3.1e-18 96.3 141 44.7
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 1.3e-16 90.9 144 43.1
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.7e-16 90.5 160 41.2
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 9.3e-15 84.7 149 39.6
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.2e-14 84.3 127 39.4
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.0e-13 81.3 193 29.5
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 1.3e-13 80.9 184 32.6
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 1.3e-13 80.9 110 44.5
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 5.1e-13 79.0 257 28.4
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 6.7e-13 78.6 151 37.1
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.3e-12 75.9 149 32.9
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 5.6e-12 75.5 106 42.5
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 7.4e-12 75.1 138 35.5
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 7.4e-12 75.1 138 37.7
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 1.6e-11 73.9 266 27.4
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 2.1e-11 73.6 151 39.7
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.1e-10 71.2 138 31.9
Psat7g166880 Pisum sativum HOM05D007287 ORTHO05D008965 3.1e-10 69.7 125 38.4
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 4.0e-10 69.3 140 30.0
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.2e-09 67.8 138 31.9
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.0e-09 67.0 103 40.8
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 1.3e-08 64.3 156 32.7
TPR.G34860 Trifolium pratense HOM05D007287 ORTHO05D008965 2.2e-08 63.5 144 34.7
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 8.4e-08 61.6 84 46.4
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.4e-07 60.8 138 30.4
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.9e-07 60.5 127 33.1
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 2.4e-07 60.1 115 34.8
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 4.2e-07 59.3 77 41.6
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.7e-06 56.6 126 32.5
AL4G21750 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 7.9e-06 55.1 83 42.2


User provided reference genes

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