Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G054900 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 4.3e-152 541.2 257 100.0
Phvul.010G056700 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 2.6e-96 355.9 208 80.3
Phvul.010G047200 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 4.1e-94 348.6 206 76.7
Phvul.010G074900 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 5.6e-83 311.6 208 74.5
Phvul.010G055000 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 5.4e-70 268.5 206 64.1
Phvul.010G024833 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 6.0e-69 265.0 208 58.7
Phvul.003G085303 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 7.8e-69 264.6 208 58.7
Phvul.009G073250 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.7e-68 263.5 208 58.2
Phvul.004G099250 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 8.6e-68 261.2 208 58.2
Phvul.011G195650 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 3.3e-67 259.2 208 57.7
Phvul.003G096101 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.2e-66 257.3 196 59.7
Phvul.L001762 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.3e-58 230.7 122 87.7
Phvul.001G104900 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 2.0e-48 196.8 206 48.1
Phvul.006G141300 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 7.6e-48 194.9 199 50.8
Phvul.007G165000 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 4.9e-47 192.2 206 47.1
Phvul.010G069900 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.9e-43 180.3 208 45.7
Phvul.008G149200 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 7.9e-37 158.3 85 84.7
Phvul.008G149100 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 6.3e-34 148.7 122 55.7
Phvul.005G077800 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.1e-30 137.9 68 89.7
Phvul.004G092200 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.3e-26 124.4 69 79.7
TPR.G9549 Trifolium pratense HOM05D009225 ORTHO05D010133 1.3e-23 114.4 190 32.1
Phvul.008G193100 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 8.5e-23 111.7 73 67.1
Phvul.007G096201 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 7.2e-22 108.6 69 66.7
Phvul.009G170300 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 4.6e-21 105.9 64 70.3
Phvul.L010443 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 6.1e-21 105.5 211 30.3
Phvul.010G087200 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 7.9e-21 105.1 65 69.2
Phvul.003G103600 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 1.8e-17 94.0 69 60.9
VMungo0331G1751 Vigna mungo HOM05D009225 ORTHO05D010133 3.1e-17 93.2 197 28.9
TPR.G2581 Trifolium pratense HOM05D000096 ORTHO05D010133 1.2e-16 91.3 198 27.3
TPR.G14904 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-15 87.8 216 27.8
Phvul.L002041 Phaseolus vulgaris HOM05D009225 ORTHO05D010133 2.9e-15 86.7 61 59.0
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-14 84.7 206 24.8
TPR.G38538 Trifolium pratense HOM05D011040 ORTHO05D010133 1.4e-14 84.3 193 29.5
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 1.2e-13 81.3 187 26.2
Glyma.18G135051 Glycine max HOM05D009225 ORTHO05D010133 2.7e-13 80.1 77 44.2
TPR.G34838 Trifolium pratense HOM05D011040 ORTHO05D010133 8.8e-12 75.1 193 26.4
Glyma.05G031450 Glycine max HOM05D023294 ORTHO05D010133 1.1e-11 74.7 186 26.3
Glyma.09G107800 Glycine max HOM05D009225 ORTHO05D010133 4.8e-10 69.3 81 35.8
Lj5g0000455 Lotus japonicus HOM05D012880 ORTHO05D015701 1.1e-09 68.2 88 35.2
Lj5g0025068 Lotus japonicus HOM05D012880 ORTHO05D015701 1.1e-09 68.2 88 35.2
LjContig00155g0008913 Lotus japonicus HOM05D012880 ORTHO05D015701 3.1e-09 66.6 88 34.1
Glyma.18G207000 Glycine max HOM05D023294 ORTHO05D010133 5.3e-09 65.9 183 24.6
Medtr4g053550 Medicago truncatula HOM05D009225 ORTHO05D010133 1.2e-08 64.7 78 35.9
TPR.G5716 Trifolium pratense HOM05D011040 ORTHO05D010133 2.0e-08 63.9 76 38.2
TPR.G17757 Trifolium pratense HOM05D000096 ORTHO05D000045 4.5e-08 62.8 137 29.9
TPR.G36246 Trifolium pratense HOM05D011040 ORTHO05D010133 4.5e-08 62.8 122 29.5


User provided reference genes

Program Settings