Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G051800 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 6.1e-64 247.3 121 100.0
Glyma.03G113900 Glycine max HOM05D006292 ORTHO05D006110 3.1e-36 155.2 121 64.5
Glyma.07G112800 Glycine max HOM05D006292 ORTHO05D006110 1.8e-31 139.4 122 63.1
arahy.Tifrunner.gnm1.ann1.92QZ6T Arachis hypogaea HOM05D006292 ORTHO05D006110 8.3e-21 104.0 121 52.1
arahy.Tifrunner.gnm1.ann1.46AG3A Arachis hypogaea HOM05D006292 ORTHO05D006110 3.2e-20 102.1 121 51.2
Lj4g0026533 Lotus japonicus HOM05D006292 ORTHO05D006110 7.8e-19 97.4 127 49.6
TPR.G28248 Trifolium pratense HOM05D006292 ORTHO05D006110 3.7e-13 78.6 123 43.1
Psat2g135960 Pisum sativum HOM05D006292 ORTHO05D006110 6.4e-13 77.8 127 44.1
Medtr8g067270 Medicago truncatula HOM05D006292 ORTHO05D006110 7.8e-11 70.9 122 42.6
Psat4g118000 Pisum sativum HOM05D006292 ORTHO05D006110 1.0e-10 70.5 120 41.7
Medtr5g030470 Medicago truncatula HOM05D006292 ORTHO05D006110 3.0e-10 68.9 130 42.3
Lj2g0014920 Lotus japonicus HOM05D006292 ORTHO05D006110 3.9e-10 68.6 127 40.9
Lalb_Chr09g0325661 Lupinus albus HOM05D006292 ORTHO05D006110 5.1e-10 68.2 126 38.9
Glyma.01G018500 Glycine max HOM05D006292 ORTHO05D006110 6.6e-10 67.8 123 41.5
Glyma.09G204400 Glycine max HOM05D006292 ORTHO05D006110 6.6e-10 67.8 123 39.8
Ca_06080_v3 Cicer arietinum L. HOM05D006292 ORTHO05D006110 1.1e-09 67.0 126 38.9
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 1.9e-09 66.2 128 41.4
TPR.G3912 Trifolium pratense HOM05D006292 ORTHO05D006110 5.6e-09 64.7 120 41.7
MD16G1274300 Malus domestica HOM05D006292 ORTHO05D006110 1.6e-08 63.2 129 38.8
COL.COLO4_17031 Corchorus olitorius HOM05D006292 ORTHO05D006110 2.1e-08 62.8 137 37.2
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 3.6e-08 62.0 141 39.7
FAN13G0922 Fragaria x ananassa HOM05D006292 ORTHO05D006110 3.6e-08 62.0 141 39.7
Phvul.002G141600 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 8.1e-08 60.8 130 34.6
Duzib205G0138 Durio zibethinus HOM05D006292 ORTHO05D006110 1.8e-07 59.7 126 37.3
Gohir.A09G201400 Gossypium hirsutum HOM05D006292 ORTHO05D006110 3.1e-07 58.9 136 39.0
Lalb_Chr05g0216081 Lupinus albus HOM05D006292 ORTHO05D006110 4.0e-07 58.5 128 36.7
Lalb_Chr09g0334701 Lupinus albus HOM05D006292 ORTHO05D006110 5.2e-07 58.2 123 38.2
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 5.2e-07 58.2 127 39.4
EL10Ac5g12118 Beta vulgaris HOM05D006292 ORTHO05D006110 8.9e-07 57.4 134 38.1
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 1.2e-06 57.0 123 42.3
Thecc.03G227700 Theobroma cacao HOM05D006292 ORTHO05D006110 1.5e-06 56.6 128 35.9
VMungo1215G0846 Vigna mungo HOM05D006292 ORTHO05D006110 1.5e-06 56.6 123 34.1
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.0e-06 56.2 128 35.9
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.0e-06 56.2 128 35.9
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 4.4e-06 55.1 141 39.7
Sed0015746 Sechium edule HOM05D006292 ORTHO05D006110 4.4e-06 55.1 127 37.0
Sopen08g025520 Solanum pennellii HOM05D006292 ORTHO05D006110 5.8e-06 54.7 123 38.2
Solyc08g076940.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 7.6e-06 54.3 123 38.2


User provided reference genes

Program Settings