Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.1e-205 718.8 364 100.0
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 1.1e-188 663.3 361 92.5
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 8.8e-175 617.1 365 85.8
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.4e-148 529.3 365 72.6
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 9.5e-145 517.3 357 71.1
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.6e-144 516.5 367 71.4
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 4.7e-144 515.0 359 73.5
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 8.9e-143 510.8 359 72.7
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 9.2e-140 500.7 362 71.0
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 5.0e-138 495.0 333 73.9
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 3.4e-126 455.7 415 60.0
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 2.8e-112 409.5 363 57.9
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.8e-111 406.8 356 59.3
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 6.9e-111 404.8 357 57.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 1.1e-108 397.5 365 58.9
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.1e-105 387.5 354 57.3
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.9e-105 386.7 421 51.5
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 9.6e-105 384.4 360 55.8
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 2.8e-104 382.9 360 55.6
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 6.2e-104 381.7 360 55.6
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.1e-103 380.9 361 55.7
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.4e-103 380.6 360 55.6
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.4e-103 380.6 357 56.0
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 1.8e-103 380.2 422 49.3
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 3.1e-103 379.4 358 56.7
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.1e-103 379.4 357 55.7
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 6.9e-103 378.3 356 56.5
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 6.9e-103 378.3 366 53.8
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 4.5e-102 375.6 354 55.9
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 9.9e-102 374.4 363 53.7
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 3.8e-101 372.5 357 56.0
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 5.4e-100 368.6 327 60.2
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.0e-98 364.4 357 56.6
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.3e-98 363.2 359 55.4
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 3.0e-98 362.8 250 72.4
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.9e-97 360.1 361 54.0
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.3e-97 359.0 362 54.4
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 5.6e-97 358.6 357 53.5
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.6e-96 357.1 358 52.5
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 8.1e-96 354.8 324 59.6
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.1e-95 354.4 360 54.2
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.4e-95 354.0 357 54.9
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.2e-94 350.9 358 51.7
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.5e-94 350.5 351 54.1
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 2.0e-94 350.1 327 56.6
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 2.2e-93 346.7 330 56.4
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 6.4e-93 345.1 357 52.7
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 6.4e-93 345.1 331 55.9
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 8.4e-93 344.7 280 59.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 3.2e-92 342.8 276 59.8
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 5.5e-92 342.0 357 54.1
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 5.5e-92 342.0 356 53.1
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.6e-91 340.5 337 54.0
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 6.0e-91 338.6 364 51.9
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 6.7e-90 335.1 361 50.7
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 8.7e-90 334.7 357 51.3
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 1.3e-88 330.9 360 50.8
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 3.7e-88 329.3 358 53.1
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 1.4e-87 327.4 281 57.3
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 6.9e-87 325.1 286 55.6
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 6.9e-87 325.1 251 64.5
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.5e-86 323.9 354 48.3
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.5e-86 323.9 418 44.5
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 2.6e-86 323.2 364 48.6
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.5e-86 322.4 360 47.5
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 2.2e-85 320.1 301 54.8
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 2.2e-85 320.1 381 48.3
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 6.1e-83 312.0 441 44.2
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 6.7e-82 308.5 366 49.2
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.1e-81 307.8 356 47.2
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.1e-81 307.8 377 48.0
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.3e-80 304.3 329 51.4
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 8.2e-80 301.6 276 54.3
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 1.2e-78 297.7 274 54.0
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 3.8e-77 292.7 356 44.9
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 6.5e-77 292.0 311 49.5
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.9e-76 290.4 368 47.3
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 4.2e-76 289.3 351 47.6
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 4.2e-76 289.3 294 50.7
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 3.6e-75 286.2 292 50.7
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 6.1e-75 285.4 332 48.2
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 2.3e-74 283.5 205 64.9
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 6.7e-74 282.0 372 44.6
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.1e-73 281.2 368 45.9
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 1.7e-69 267.3 266 54.1
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.7e-69 267.3 373 44.8
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 8.8e-66 255.0 264 52.7
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.2e-64 250.4 258 53.1
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 9.1e-63 245.0 334 43.1
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 8.5e-61 238.4 412 38.6
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.2e-59 234.6 567 31.6
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 3.0e-58 229.9 251 50.6
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 1.6e-54 217.6 340 40.6
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 3.5e-54 216.5 263 47.5
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.8e-47 194.1 165 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.7e-45 187.6 271 39.1
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.4e-41 173.3 210 46.7
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 1.3e-40 171.4 179 49.2
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.2e-38 164.9 162 50.6
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 3.6e-35 153.3 355 31.5
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.2e-33 148.3 120 64.2
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.2e-30 138.3 105 62.9
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 7.8e-30 135.6 104 66.3
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 1.9e-28 131.0 102 65.7
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 8.9e-26 122.1 233 36.9
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.9e-21 106.7 170 35.3
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 4.4e-17 93.2 115 47.0
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 8.3e-16 89.0 67 65.7
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 1.4e-15 88.2 82 58.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.9e-15 87.8 344 25.3
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 3.5e-14 83.6 232 28.4
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 3.5e-14 83.6 73 57.5
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 4.4e-09 66.6 44 63.6
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 7.6e-09 65.9 37 78.4
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 2.9e-08 63.9 137 36.5
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 1.4e-07 61.6 221 24.0
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 7.8e-06 55.8 123 31.7


User provided reference genes

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