Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 1.7e-307 1058.5 531 100.0
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 6.4e-283 976.9 532 91.2
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 5.6e-263 910.6 545 86.1
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.8e-248 862.4 539 81.3
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 6.7e-248 860.5 540 80.4
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 9.6e-247 856.7 540 80.0
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 2.0e-244 849.0 544 82.5
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 3.9e-240 834.7 540 78.0
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 4.1e-237 824.7 539 78.5
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 2.0e-236 822.4 545 76.0
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 6.9e-229 797.3 545 74.1
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 1.5e-228 796.2 545 73.8
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.3e-214 750.0 549 68.9
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.5e-210 735.7 551 67.5
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 9.1e-205 717.2 535 68.8
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.0e-203 713.8 547 66.9
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.3e-203 713.4 533 67.2
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.7e-203 713.0 551 65.2
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 7.2e-202 707.6 551 64.8
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.6e-201 706.4 551 64.6
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 6.1e-201 704.5 569 64.1
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 8.0e-201 704.1 552 64.7
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.4e-200 703.4 547 65.3
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 4.4e-199 698.4 555 64.7
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 9.8e-199 697.2 549 64.5
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 5.4e-197 691.4 547 64.9
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 9.1e-197 690.6 552 63.6
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 2.2e-195 686.0 552 63.2
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 3.8e-195 685.3 550 63.5
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 1.1e-194 683.7 548 63.3
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 5.5e-194 681.4 539 64.2
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 1.6e-193 679.9 530 65.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.1e-193 679.5 532 64.1
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.1e-193 679.5 530 65.1
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 6.1e-193 677.9 536 65.3
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.8e-192 676.4 542 63.3
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 6.8e-192 674.5 532 63.5
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-191 673.7 532 63.7
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-191 673.3 532 64.1
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.7e-191 671.4 532 63.3
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 5.7e-191 671.4 537 63.1
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.2e-190 669.5 532 63.5
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 3.7e-190 668.7 553 61.8
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 8.3e-190 667.5 545 62.4
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 7.0e-189 664.5 529 64.1
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.3e-187 660.2 500 67.8
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 8.6e-187 657.5 546 61.4
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 1.9e-186 656.4 552 62.0
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.6e-185 652.1 548 61.1
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 3.6e-185 652.1 537 59.2
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 6.1e-185 651.4 541 62.7
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 1.5e-183 646.7 543 60.0
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 2.2e-182 642.9 508 62.8
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.6e-180 636.7 539 59.6
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 4.6e-180 635.2 505 62.0
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 4.0e-176 622.1 551 59.2
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 5.2e-176 621.7 547 58.5
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 2.6e-175 619.4 550 58.5
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 1.7e-174 616.7 508 63.4
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 1.7e-174 616.7 554 57.9
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 1.7e-174 616.7 540 59.3
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.1e-173 614.0 541 57.7
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.1e-173 614.0 563 56.5
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 4.1e-173 612.1 554 57.6
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 7.0e-173 611.3 547 57.8
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 9.2e-173 610.9 542 58.3
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 3.5e-172 609.0 583 54.5
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 7.8e-172 607.8 558 57.5
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 8.6e-171 604.4 567 54.9
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 8.6e-171 604.4 554 58.3
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 2.5e-170 602.8 545 56.9
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 4.0e-168 595.5 553 59.1
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 8.9e-168 594.3 549 55.7
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 9.8e-167 590.9 546 56.6
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 1.3e-166 590.5 551 55.7
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 2.4e-165 586.3 570 53.9
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 7.1e-165 584.7 533 56.5
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 1.2e-164 583.9 548 56.4
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 2.1e-164 583.2 532 55.8
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 7.8e-164 581.3 545 55.8
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 1.0e-163 580.9 692 48.8
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 1.3e-163 580.5 549 56.3
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.2e-159 567.4 490 58.0
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 6.4e-158 561.6 549 55.9
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 2.4e-157 559.7 547 54.1
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 3.5e-156 555.8 559 53.3
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 4.6e-156 555.4 546 53.8
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 4.6e-156 555.4 548 53.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 6.0e-156 555.1 548 54.4
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 3.9e-155 552.4 558 53.0
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 1.5e-154 550.4 558 52.9
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.1e-152 544.3 558 52.5
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 5.2e-152 542.0 543 54.0
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 5.8e-151 538.5 567 52.0
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.3e-150 537.3 553 52.6
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 3.8e-150 535.8 591 50.1
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.4e-149 533.9 556 50.7
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 5.4e-149 531.9 513 54.0
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 7.1e-149 531.6 412 64.1
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.6e-148 530.4 530 52.3
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 3.0e-147 526.2 444 59.2
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.5e-140 502.7 702 45.4
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.1e-138 497.7 514 52.1
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.2e-135 487.6 473 55.2
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 3.0e-131 473.0 559 48.1
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 1.8e-123 447.2 339 67.6
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 5.3e-120 435.6 364 62.6
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.7e-116 423.3 323 66.6
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 1.1e-112 411.4 391 56.5
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 6.5e-110 402.1 311 65.9
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 7.2e-109 398.7 341 60.7
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 7.9e-100 368.6 336 59.5
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 2.2e-97 360.5 526 39.9
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 9.1e-96 355.1 371 53.4
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 5.5e-93 345.9 523 41.1
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.0e-91 341.7 535 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 4.8e-89 332.8 538 37.0
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 4.5e-87 326.2 350 53.7
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 5.5e-85 319.3 530 37.9
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.0e-83 315.1 337 53.7
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 2.6e-82 310.5 377 45.4
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 3.2e-77 293.5 329 47.7
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 3.3e-61 240.4 143 80.4
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.1e-60 237.7 193 56.0
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.9e-56 224.6 132 80.3
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 1.6e-55 221.5 163 68.7
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 3.0e-54 217.2 134 75.4
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.5e-53 214.2 166 54.8
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.8e-52 210.7 151 66.9
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 9.9e-50 202.2 140 67.1
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.0e-42 177.9 104 75.0
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 3.8e-41 173.7 580 26.9
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 1.7e-38 164.9 203 42.9
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.4e-32 144.4 98 72.4
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 8.7e-30 136.0 128 57.0
unitig_578.g16281 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-25 122.1 136 44.9
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 2.9e-25 120.9 130 49.2
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 1.4e-24 118.6 113 52.2
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.3e-22 111.3 99 54.5
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.3e-21 107.1 100 56.0
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.1e-20 104.8 91 60.4
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.0e-19 99.4 53 83.0
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 2.2e-17 94.7 103 53.4
QL01p003984 Quercus lobata HOM05D004567 ORTHO05D000318 2.2e-17 94.7 76 59.2
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 2.2e-17 94.7 104 50.0
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.5e-13 81.3 110 43.6
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.4e-11 75.5 104 38.5
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 2.6e-10 71.2 150 38.0
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 6.5e-09 66.6 70 45.7
Cre06.g258400 Chlamydomonas reinhardtii HOM05D004567 ORTHO05D005726 6.7e-06 56.6 131 25.2


User provided reference genes

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